Running all stages#
About#
Path: examples/academic/all_stages.
Configuring#
workflow.cfg#[cycles]
begin_date=2023-08-01
end_date=2023-08-03
round=1D
freq=1D
indep=True
as_intervals=False
[groups]
group0=gtask0,gtask1
group1=gtask2,gtask3
[stages]
dry_run=True
[[prolog]]
prolog0=ptask0,ptask1,group0
prolog1=ptask2,ptask3
[[cycles]]
cycles0=ctask0,ctask1,group1
cycles1=ctask2,ctask3
[[epilog]]
epilog0=etask0,etask1
epilog1=etask2,etask3
tasks.cfg## For groups
[gtask0]
[[content]]
commandline=echo hoho ; echo gtask0 > gtask0.out >> $WOOM_WORKFLOW_DIR/workflow.out
[gtask1]
[[content]]
commandline=echo gtask1 > gtask1.out >> $WOOM_WORKFLOW_DIR/workflow.out
[gtask2]
[[content]]
commandline=echo gtask2 $WOOM_CYCLE_TOKEN > gtask2.out >> $WOOM_WORKFLOW_DIR/workflow.out
[gtask3]
[[content]]
commandline=echo gtask3 $WOOM_CYCLE_TOKEN > gtask3.out >> $WOOM_WORKFLOW_DIR/workflow.out
# For prolog
[ptask0]
[[content]]
commandline=echo ptask0 > ptask0.out >> $WOOM_WORKFLOW_DIR/workflow.out
[ptask1]
[[content]]
commandline=echo ptask1 > ptask1.out >> $WOOM_WORKFLOW_DIR/workflow.out
[ptask2]
[[content]]
commandline=echo ptask2 > ptask2.out >> $WOOM_WORKFLOW_DIR/workflow.out
[ptask3]
[[content]]
commandline=echo ptask3 > ptask3.out >> $WOOM_WORKFLOW_DIR/workflow.out
# For cycles
[ctask0]
[[content]]
commandline=sleep 5 ; echo ctask0 $WOOM_CYCLE_TOKEN > ctask0.out >> $WOOM_WORKFLOW_DIR/workflow.out
[[submit]]
queue=omp
[ctask1]
[[content]]
commandline=echo ctask1 $WOOM_CYCLE_TOKEN > ctask1.out >> $WOOM_WORKFLOW_DIR/workflow.out
[[submit]]
queue=omp
[ctask2]
[[content]]
commandline=echo ctask2 $WOOM_CYCLE_TOKEN> ctask2.out >> $WOOM_WORKFLOW_DIR/workflow.out
[[submit]]
queue=omp
[ctask3]
[[content]]
commandline=echo ctask3 $WOOM_CYCLE_TOKEN > ctask3.out >> $WOOM_WORKFLOW_DIR/workflow.out
[[submit]]
queue=omp
# For epilog
[etask0]
[[content]]
commandline=echo etask0 > etask0.out >> $WOOM_WORKFLOW_DIR/workflow.out
[etask1]
[[content]]
commandline=echo etask1 > etask1.out >> $WOOM_WORKFLOW_DIR/workflow.out
[etask2]
[[content]]
commandline=echo etask2 > etask2.out >> $WOOM_WORKFLOW_DIR/workflow.out
[etask3]
[[content]]
commandline=sleep 5 ; echo etask3 > etask3.out >> $WOOM_WORKFLOW_DIR/workflow.out
hosts.cfg#[datarmor]
patterns=datavisu*,*.ice.ifremer.fr,datarmor*
scheduler=pbspro
module_setup=. /etc/profile.d/modules.sh
[[queues]]
seq=sequentiel
omp=omp
[[dirs]]
scratch=$SCRATCH
work=$DATAWORK
Running#
Overview#
Let’s have an overview of stages before running the workflow.
$ woom show overview
################################## TASK TREE ###################################
prolog:
- prolog0: ptask0 // ptask1 // [gtask0 -> gtask1]
- prolog1: ptask2 // ptask3
cycles:
- cycles0: ctask0 // ctask1 // [gtask2 -> gtask3]
- cycles1: ctask2 // ctask3
epilog:
- epilog0: etask0 // etask1
- epilog1: etask2 // etask3
#################################### CYCLES ####################################
2023-08-01T00:00:00+00:00
2023-08-02T00:00:00+00:00
2023-08-03T00:00:00+00:00
################################### ENSEMBLE ###################################
no member
Dry run#
Now let’s run the workflow in test (dry) and debug modes.
$ woom run --log-no-color --log-level debug --dry-run
woom.log : DEBUG *** STARTED LOG SESSION ***
woom.cli : DEBUG Run the workflow
woom.cli : DEBUG Loading extensions
woom.cli : INFO No extension to load
woom.cli : DEBUG Load workflow config: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/workflow.cfg
woom.cli : INFO Loaded workflow config
woom.cli : DEBUG Initialize the host manager
woom.cli : INFO Initialized the host manager
woom.cli : DEBUG Load hosts config file: hosts.cfg
woom.cli : INFO Loaded hosts config file: hosts.cfg
woom.cli : DEBUG Infer host
woom.cli : INFO Infered host: local
woom.cli : DEBUG Initialize the task manager
woom.cli : INFO Initialized the task manager
woom.cli : DEBUG Load the task config file: tasks.cfg
woom.cli : INFO Loaded the task config file: tasks.cfg
woom.cli : DEBUG Initialize the workflow
woom.workflow: DEBUG Task tree:
prolog:
- prolog0: ptask0 // ptask1 // [gtask0 -> gtask1]
- prolog1: ptask2 // ptask3
cycles:
- cycles0: ctask0 // ctask1 // [gtask2 -> gtask3]
- cycles1: ctask2 // ctask3
epilog:
- epilog0: etask0 // etask1
- epilog1: etask2 // etask3
woom.cli : INFO Initialized the workflow
woom.cli : INFO Successfully setup the workflow!
woom.cli : DEBUG Run the workflow
woom.workflow: DEBUG Running the workflow in fake mode
woom.workflow: DEBUG Entering stage: prolog
woom.workflow: DEBUG Entering sequence: prolog0
woom.workflow: DEBUG Running task: prolog/prolog0/ptask0
woom.job : INFO Started job manager: BackgroundJobManager()
woom.workflow: DEBUG Cleaning task: prolog/prolog0/ptask0
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask0/job.sh
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask0/job.err
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask0/job.out
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask0/job.json
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask0/job.status
woom.workflow: DEBUG Submitting task: prolog/prolog0/ptask0
woom.workflow: DEBUG Dependencies:
woom.workflow: DEBUG Fake submission:
--------------- submission command ---------------
bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask0/job.sh
-------------- batch script content --------------
#!/bin/bash
# Prolog
set -eo pipefail
on_exit() {
status=$?
echo $status > "$WOOM_SUBMISSION_DIR/job.status"
exit $status
}
trap on_exit EXIT
# Environment variables
export WOOM_TASK_NAME="ptask0"
export WOOM_RUN_DIR="/home/docs/woom/scratch/woom/prolog/ptask0"
export WOOM_APP_NAME=""
export WOOM_APP_CONF=""
export WOOM_APP_EXP=""
export WOOM_CYCLES_BEGIN_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLES_END_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLES_ROUND="1D"
export WOOM_CYCLES_FREQ="1D"
export WOOM_CYCLES_INDEP="1"
export WOOM_CYCLES_AS_INTERVALS="0"
export WOOM_CYCLES_NCYCLES="0"
export WOOM_APP_PATH=""
export WOOM_TASK_PATH="prolog/ptask0"
export WOOM_NMEMBERS="0"
export WOOM_WORKFLOW_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages"
export WOOM_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask0"
export WOOM_LOG_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/log"
export WOOM_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask0/job.sh"
export PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:$PATH
export PYTHONPATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:$PYTHONPATH
export LIBRARY_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:$LIBRARY_PATH
export INCLUDE_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:$INCLUDE_PATH
# Go to run dir
mkdir -p /home/docs/woom/scratch/woom/prolog/ptask0 && cd /home/docs/woom/scratch/woom/prolog/ptask0
# Run the commandline(s)
echo ptask0 > ptask0.out >> $WOOM_WORKFLOW_DIR/workflow.out
--------------------------------------------------
woom.workflow: INFO Submitted task: prolog/prolog0/ptask0 with job id 137055
woom.workflow: DEBUG Running task: prolog/prolog0/ptask1
woom.workflow: DEBUG Cleaning task: prolog/prolog0/ptask1
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask1/job.sh
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask1/job.err
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask1/job.out
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask1/job.json
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask1/job.status
woom.workflow: DEBUG Submitting task: prolog/prolog0/ptask1
woom.workflow: DEBUG Dependencies:
woom.workflow: DEBUG Fake submission:
--------------- submission command ---------------
bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask1/job.sh
-------------- batch script content --------------
#!/bin/bash
# Prolog
set -eo pipefail
on_exit() {
status=$?
echo $status > "$WOOM_SUBMISSION_DIR/job.status"
exit $status
}
trap on_exit EXIT
# Environment variables
export WOOM_TASK_NAME="ptask1"
export WOOM_RUN_DIR="/home/docs/woom/scratch/woom/prolog/ptask1"
export WOOM_APP_NAME=""
export WOOM_APP_CONF=""
export WOOM_APP_EXP=""
export WOOM_CYCLES_BEGIN_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLES_END_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLES_ROUND="1D"
export WOOM_CYCLES_FREQ="1D"
export WOOM_CYCLES_INDEP="1"
export WOOM_CYCLES_AS_INTERVALS="0"
export WOOM_CYCLES_NCYCLES="0"
export WOOM_APP_PATH=""
export WOOM_TASK_PATH="prolog/ptask1"
export WOOM_NMEMBERS="0"
export WOOM_WORKFLOW_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages"
export WOOM_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask1"
export WOOM_LOG_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/log"
export WOOM_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask1/job.sh"
export PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:$PATH
export PYTHONPATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:$PYTHONPATH
export LIBRARY_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:$LIBRARY_PATH
export INCLUDE_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:$INCLUDE_PATH
# Go to run dir
mkdir -p /home/docs/woom/scratch/woom/prolog/ptask1 && cd /home/docs/woom/scratch/woom/prolog/ptask1
# Run the commandline(s)
echo ptask1 > ptask1.out >> $WOOM_WORKFLOW_DIR/workflow.out
--------------------------------------------------
woom.workflow: INFO Submitted task: prolog/prolog0/ptask1 with job id 326372
woom.workflow: DEBUG Group of 2 sequential tasks:
woom.workflow: DEBUG Running task: prolog/prolog0/gtask0
woom.workflow: DEBUG Cleaning task: prolog/prolog0/gtask0
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/gtask0/job.sh
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/gtask0/job.err
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/gtask0/job.out
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/gtask0/job.json
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/gtask0/job.status
woom.workflow: DEBUG Submitting task: prolog/prolog0/gtask0
woom.workflow: DEBUG Dependencies:
woom.workflow: DEBUG Fake submission:
--------------- submission command ---------------
bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/gtask0/job.sh
-------------- batch script content --------------
#!/bin/bash
# Prolog
set -eo pipefail
on_exit() {
status=$?
echo $status > "$WOOM_SUBMISSION_DIR/job.status"
exit $status
}
trap on_exit EXIT
# Environment variables
export WOOM_TASK_NAME="gtask0"
export WOOM_RUN_DIR="/home/docs/woom/scratch/woom/prolog/gtask0"
export WOOM_APP_NAME=""
export WOOM_APP_CONF=""
export WOOM_APP_EXP=""
export WOOM_CYCLES_BEGIN_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLES_END_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLES_ROUND="1D"
export WOOM_CYCLES_FREQ="1D"
export WOOM_CYCLES_INDEP="1"
export WOOM_CYCLES_AS_INTERVALS="0"
export WOOM_CYCLES_NCYCLES="0"
export WOOM_APP_PATH=""
export WOOM_TASK_PATH="prolog/gtask0"
export WOOM_NMEMBERS="0"
export WOOM_WORKFLOW_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages"
export WOOM_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/gtask0"
export WOOM_LOG_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/log"
export WOOM_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/gtask0/job.sh"
export PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:$PATH
export PYTHONPATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:$PYTHONPATH
export LIBRARY_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:$LIBRARY_PATH
export INCLUDE_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:$INCLUDE_PATH
# Go to run dir
mkdir -p /home/docs/woom/scratch/woom/prolog/gtask0 && cd /home/docs/woom/scratch/woom/prolog/gtask0
# Run the commandline(s)
echo hoho ; echo gtask0 > gtask0.out >> $WOOM_WORKFLOW_DIR/workflow.out
--------------------------------------------------
woom.workflow: INFO Submitted task: prolog/prolog0/gtask0 with job id 458407
woom.workflow: DEBUG Running task: prolog/prolog0/gtask1
woom.workflow: DEBUG Cleaning task: prolog/prolog0/gtask1
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/gtask1/job.sh
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/gtask1/job.err
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/gtask1/job.out
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/gtask1/job.json
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/gtask1/job.status
woom.workflow: DEBUG Submitting task: prolog/prolog0/gtask1
woom.workflow: DEBUG Dependencies: 458407
woom.workflow: DEBUG Fake submission:
--------------- submission command ---------------
bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/gtask1/job.sh
-------------- batch script content --------------
#!/bin/bash
# Prolog
set -eo pipefail
on_exit() {
status=$?
echo $status > "$WOOM_SUBMISSION_DIR/job.status"
exit $status
}
trap on_exit EXIT
# Environment variables
export WOOM_TASK_NAME="gtask1"
export WOOM_RUN_DIR="/home/docs/woom/scratch/woom/prolog/gtask1"
export WOOM_APP_NAME=""
export WOOM_APP_CONF=""
export WOOM_APP_EXP=""
export WOOM_CYCLES_BEGIN_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLES_END_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLES_ROUND="1D"
export WOOM_CYCLES_FREQ="1D"
export WOOM_CYCLES_INDEP="1"
export WOOM_CYCLES_AS_INTERVALS="0"
export WOOM_CYCLES_NCYCLES="0"
export WOOM_APP_PATH=""
export WOOM_TASK_PATH="prolog/gtask1"
export WOOM_NMEMBERS="0"
export WOOM_WORKFLOW_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages"
export WOOM_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/gtask1"
export WOOM_LOG_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/log"
export WOOM_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/gtask1/job.sh"
export PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:$PATH
export PYTHONPATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:$PYTHONPATH
export LIBRARY_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:$LIBRARY_PATH
export INCLUDE_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:$INCLUDE_PATH
# Go to run dir
mkdir -p /home/docs/woom/scratch/woom/prolog/gtask1 && cd /home/docs/woom/scratch/woom/prolog/gtask1
# Run the commandline(s)
echo gtask1 > gtask1.out >> $WOOM_WORKFLOW_DIR/workflow.out
--------------------------------------------------
woom.workflow: INFO Submitted task: prolog/prolog0/gtask1 with job id 11483 depending on [458407]
woom.workflow: DEBUG Entering sequence: prolog1
woom.workflow: DEBUG Running task: prolog/prolog1/ptask2
woom.workflow: DEBUG Cleaning task: prolog/prolog1/ptask2
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask2/job.sh
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask2/job.err
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask2/job.out
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask2/job.json
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask2/job.status
woom.workflow: DEBUG Submitting task: prolog/prolog1/ptask2
woom.workflow: DEBUG Dependencies: 137055, 326372, 11483
woom.workflow: DEBUG Fake submission:
--------------- submission command ---------------
bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask2/job.sh
-------------- batch script content --------------
#!/bin/bash
# Prolog
set -eo pipefail
on_exit() {
status=$?
echo $status > "$WOOM_SUBMISSION_DIR/job.status"
exit $status
}
trap on_exit EXIT
# Environment variables
export WOOM_TASK_NAME="ptask2"
export WOOM_RUN_DIR="/home/docs/woom/scratch/woom/prolog/ptask2"
export WOOM_APP_NAME=""
export WOOM_APP_CONF=""
export WOOM_APP_EXP=""
export WOOM_CYCLES_BEGIN_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLES_END_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLES_ROUND="1D"
export WOOM_CYCLES_FREQ="1D"
export WOOM_CYCLES_INDEP="1"
export WOOM_CYCLES_AS_INTERVALS="0"
export WOOM_CYCLES_NCYCLES="0"
export WOOM_APP_PATH=""
export WOOM_TASK_PATH="prolog/ptask2"
export WOOM_NMEMBERS="0"
export WOOM_WORKFLOW_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages"
export WOOM_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask2"
export WOOM_LOG_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/log"
export WOOM_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask2/job.sh"
export PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:$PATH
export PYTHONPATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:$PYTHONPATH
export LIBRARY_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:$LIBRARY_PATH
export INCLUDE_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:$INCLUDE_PATH
# Go to run dir
mkdir -p /home/docs/woom/scratch/woom/prolog/ptask2 && cd /home/docs/woom/scratch/woom/prolog/ptask2
# Run the commandline(s)
echo ptask2 > ptask2.out >> $WOOM_WORKFLOW_DIR/workflow.out
--------------------------------------------------
woom.workflow: INFO Submitted task: prolog/prolog1/ptask2 with job id 166833 depending on [137055, 326372, 11483]
woom.workflow: DEBUG Running task: prolog/prolog1/ptask3
woom.workflow: DEBUG Cleaning task: prolog/prolog1/ptask3
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask3/job.sh
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask3/job.err
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask3/job.out
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask3/job.json
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask3/job.status
woom.workflow: DEBUG Submitting task: prolog/prolog1/ptask3
woom.workflow: DEBUG Dependencies: 137055, 326372, 11483
woom.workflow: DEBUG Fake submission:
--------------- submission command ---------------
bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask3/job.sh
-------------- batch script content --------------
#!/bin/bash
# Prolog
set -eo pipefail
on_exit() {
status=$?
echo $status > "$WOOM_SUBMISSION_DIR/job.status"
exit $status
}
trap on_exit EXIT
# Environment variables
export WOOM_TASK_NAME="ptask3"
export WOOM_RUN_DIR="/home/docs/woom/scratch/woom/prolog/ptask3"
export WOOM_APP_NAME=""
export WOOM_APP_CONF=""
export WOOM_APP_EXP=""
export WOOM_CYCLES_BEGIN_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLES_END_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLES_ROUND="1D"
export WOOM_CYCLES_FREQ="1D"
export WOOM_CYCLES_INDEP="1"
export WOOM_CYCLES_AS_INTERVALS="0"
export WOOM_CYCLES_NCYCLES="0"
export WOOM_APP_PATH=""
export WOOM_TASK_PATH="prolog/ptask3"
export WOOM_NMEMBERS="0"
export WOOM_WORKFLOW_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages"
export WOOM_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask3"
export WOOM_LOG_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/log"
export WOOM_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask3/job.sh"
export PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:$PATH
export PYTHONPATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:$PYTHONPATH
export LIBRARY_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:$LIBRARY_PATH
export INCLUDE_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:$INCLUDE_PATH
# Go to run dir
mkdir -p /home/docs/woom/scratch/woom/prolog/ptask3 && cd /home/docs/woom/scratch/woom/prolog/ptask3
# Run the commandline(s)
echo ptask3 > ptask3.out >> $WOOM_WORKFLOW_DIR/workflow.out
--------------------------------------------------
woom.workflow: INFO Submitted task: prolog/prolog1/ptask3 with job id 868657 depending on [137055, 326372, 11483]
woom.workflow: INFO Successfully submitted stage: prolog
woom.workflow: DEBUG Entering stage: cycles
woom.workflow: INFO Cycling on independant dates from 2023-08-01 00:00:00+00:00 to 2023-08-03 00:00:00+00:00 in 3 time(s)
woom.workflow: DEBUG Running cycle: 2023-08-01T00:00:00+00:00
woom.workflow: DEBUG Entering sequence: cycles0
woom.workflow: DEBUG Running task: cycles/cycles0/ctask0
woom.workflow: DEBUG Cleaning task: cycles/cycles0/ctask0
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask0/job.sh
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask0/job.err
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask0/job.out
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask0/job.json
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask0/job.status
woom.workflow: DEBUG Submitting task: cycles/cycles0/ctask0
woom.workflow: DEBUG Dependencies: 166833, 868657
woom.workflow: DEBUG Fake submission:
--------------- submission command ---------------
bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask0/job.sh
-------------- batch script content --------------
#!/bin/bash
# Prolog
set -eo pipefail
on_exit() {
status=$?
echo $status > "$WOOM_SUBMISSION_DIR/job.status"
exit $status
}
trap on_exit EXIT
# Environment variables
export WOOM_TASK_NAME="ctask0"
export WOOM_RUN_DIR="/home/docs/woom/scratch/woom/2023-08-01T00:00:00+00:00/ctask0"
export WOOM_APP_NAME=""
export WOOM_APP_CONF=""
export WOOM_APP_EXP=""
export WOOM_CYCLES_BEGIN_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLES_END_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLES_ROUND="1D"
export WOOM_CYCLES_FREQ="1D"
export WOOM_CYCLES_INDEP="1"
export WOOM_CYCLES_AS_INTERVALS="0"
export WOOM_CYCLES_NCYCLES="0"
export WOOM_APP_PATH=""
export WOOM_TASK_PATH="2023-08-01T00:00:00+00:00/ctask0"
export WOOM_CYCLE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_LABEL="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_TOKEN="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST="1"
export WOOM_CYCLE_IS_LAST="0"
export WOOM_CYCLE_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_PREV=""
export WOOM_CYCLE_BEGIN_DATE_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_LABEL_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_TOKEN_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_DATE_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST_NEXT="0"
export WOOM_CYCLE_IS_LAST_NEXT="0"
export WOOM_CYCLE_NEXT_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_PREV_NEXT="2023-08-01T00:00:00+00:00"
export WOOM_NMEMBERS="0"
export WOOM_WORKFLOW_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages"
export WOOM_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask0"
export WOOM_LOG_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/log"
export WOOM_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask0/job.sh"
export PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:$PATH
export PYTHONPATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:$PYTHONPATH
export LIBRARY_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:$LIBRARY_PATH
export INCLUDE_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:$INCLUDE_PATH
# Go to run dir
mkdir -p /home/docs/woom/scratch/woom/2023-08-01T00:00:00+00:00/ctask0 && cd /home/docs/woom/scratch/woom/2023-08-01T00:00:00+00:00/ctask0
# Run the commandline(s)
sleep 5 ; echo ctask0 $WOOM_CYCLE_TOKEN > ctask0.out >> $WOOM_WORKFLOW_DIR/workflow.out
--------------------------------------------------
woom.workflow: INFO Submitted task: cycles/cycles0/ctask0 with job id 661889 depending on [166833, 868657]
woom.workflow: DEBUG Running task: cycles/cycles0/ctask1
woom.workflow: DEBUG Cleaning task: cycles/cycles0/ctask1
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask1/job.sh
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask1/job.err
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask1/job.out
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask1/job.json
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask1/job.status
woom.workflow: DEBUG Submitting task: cycles/cycles0/ctask1
woom.workflow: DEBUG Dependencies: 166833, 868657
woom.workflow: DEBUG Fake submission:
--------------- submission command ---------------
bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask1/job.sh
-------------- batch script content --------------
#!/bin/bash
# Prolog
set -eo pipefail
on_exit() {
status=$?
echo $status > "$WOOM_SUBMISSION_DIR/job.status"
exit $status
}
trap on_exit EXIT
# Environment variables
export WOOM_TASK_NAME="ctask1"
export WOOM_RUN_DIR="/home/docs/woom/scratch/woom/2023-08-01T00:00:00+00:00/ctask1"
export WOOM_APP_NAME=""
export WOOM_APP_CONF=""
export WOOM_APP_EXP=""
export WOOM_CYCLES_BEGIN_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLES_END_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLES_ROUND="1D"
export WOOM_CYCLES_FREQ="1D"
export WOOM_CYCLES_INDEP="1"
export WOOM_CYCLES_AS_INTERVALS="0"
export WOOM_CYCLES_NCYCLES="0"
export WOOM_APP_PATH=""
export WOOM_TASK_PATH="2023-08-01T00:00:00+00:00/ctask1"
export WOOM_CYCLE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_LABEL="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_TOKEN="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST="1"
export WOOM_CYCLE_IS_LAST="0"
export WOOM_CYCLE_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_PREV=""
export WOOM_CYCLE_BEGIN_DATE_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_LABEL_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_TOKEN_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_DATE_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST_NEXT="0"
export WOOM_CYCLE_IS_LAST_NEXT="0"
export WOOM_CYCLE_NEXT_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_PREV_NEXT="2023-08-01T00:00:00+00:00"
export WOOM_NMEMBERS="0"
export WOOM_WORKFLOW_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages"
export WOOM_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask1"
export WOOM_LOG_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/log"
export WOOM_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask1/job.sh"
export PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:$PATH
export PYTHONPATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:$PYTHONPATH
export LIBRARY_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:$LIBRARY_PATH
export INCLUDE_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:$INCLUDE_PATH
# Go to run dir
mkdir -p /home/docs/woom/scratch/woom/2023-08-01T00:00:00+00:00/ctask1 && cd /home/docs/woom/scratch/woom/2023-08-01T00:00:00+00:00/ctask1
# Run the commandline(s)
echo ctask1 $WOOM_CYCLE_TOKEN > ctask1.out >> $WOOM_WORKFLOW_DIR/workflow.out
--------------------------------------------------
woom.workflow: INFO Submitted task: cycles/cycles0/ctask1 with job id 462915 depending on [166833, 868657]
woom.workflow: DEBUG Group of 2 sequential tasks:
woom.workflow: DEBUG Running task: cycles/cycles0/gtask2
woom.workflow: DEBUG Cleaning task: cycles/cycles0/gtask2
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/gtask2/job.sh
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/gtask2/job.err
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/gtask2/job.out
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/gtask2/job.json
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/gtask2/job.status
woom.workflow: DEBUG Submitting task: cycles/cycles0/gtask2
woom.workflow: DEBUG Dependencies: 166833, 868657
woom.workflow: DEBUG Fake submission:
--------------- submission command ---------------
bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/gtask2/job.sh
-------------- batch script content --------------
#!/bin/bash
# Prolog
set -eo pipefail
on_exit() {
status=$?
echo $status > "$WOOM_SUBMISSION_DIR/job.status"
exit $status
}
trap on_exit EXIT
# Environment variables
export WOOM_TASK_NAME="gtask2"
export WOOM_RUN_DIR="/home/docs/woom/scratch/woom/2023-08-01T00:00:00+00:00/gtask2"
export WOOM_APP_NAME=""
export WOOM_APP_CONF=""
export WOOM_APP_EXP=""
export WOOM_CYCLES_BEGIN_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLES_END_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLES_ROUND="1D"
export WOOM_CYCLES_FREQ="1D"
export WOOM_CYCLES_INDEP="1"
export WOOM_CYCLES_AS_INTERVALS="0"
export WOOM_CYCLES_NCYCLES="0"
export WOOM_APP_PATH=""
export WOOM_TASK_PATH="2023-08-01T00:00:00+00:00/gtask2"
export WOOM_CYCLE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_LABEL="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_TOKEN="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST="1"
export WOOM_CYCLE_IS_LAST="0"
export WOOM_CYCLE_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_PREV=""
export WOOM_CYCLE_BEGIN_DATE_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_LABEL_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_TOKEN_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_DATE_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST_NEXT="0"
export WOOM_CYCLE_IS_LAST_NEXT="0"
export WOOM_CYCLE_NEXT_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_PREV_NEXT="2023-08-01T00:00:00+00:00"
export WOOM_NMEMBERS="0"
export WOOM_WORKFLOW_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages"
export WOOM_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/gtask2"
export WOOM_LOG_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/log"
export WOOM_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/gtask2/job.sh"
export PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:$PATH
export PYTHONPATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:$PYTHONPATH
export LIBRARY_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:$LIBRARY_PATH
export INCLUDE_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:$INCLUDE_PATH
# Go to run dir
mkdir -p /home/docs/woom/scratch/woom/2023-08-01T00:00:00+00:00/gtask2 && cd /home/docs/woom/scratch/woom/2023-08-01T00:00:00+00:00/gtask2
# Run the commandline(s)
echo gtask2 $WOOM_CYCLE_TOKEN > gtask2.out >> $WOOM_WORKFLOW_DIR/workflow.out
--------------------------------------------------
woom.workflow: INFO Submitted task: cycles/cycles0/gtask2 with job id 264698 depending on [166833, 868657]
woom.workflow: DEBUG Running task: cycles/cycles0/gtask3
woom.workflow: DEBUG Cleaning task: cycles/cycles0/gtask3
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/gtask3/job.sh
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/gtask3/job.err
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/gtask3/job.out
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/gtask3/job.json
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/gtask3/job.status
woom.workflow: DEBUG Submitting task: cycles/cycles0/gtask3
woom.workflow: DEBUG Dependencies: 264698
woom.workflow: DEBUG Fake submission:
--------------- submission command ---------------
bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/gtask3/job.sh
-------------- batch script content --------------
#!/bin/bash
# Prolog
set -eo pipefail
on_exit() {
status=$?
echo $status > "$WOOM_SUBMISSION_DIR/job.status"
exit $status
}
trap on_exit EXIT
# Environment variables
export WOOM_TASK_NAME="gtask3"
export WOOM_RUN_DIR="/home/docs/woom/scratch/woom/2023-08-01T00:00:00+00:00/gtask3"
export WOOM_APP_NAME=""
export WOOM_APP_CONF=""
export WOOM_APP_EXP=""
export WOOM_CYCLES_BEGIN_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLES_END_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLES_ROUND="1D"
export WOOM_CYCLES_FREQ="1D"
export WOOM_CYCLES_INDEP="1"
export WOOM_CYCLES_AS_INTERVALS="0"
export WOOM_CYCLES_NCYCLES="0"
export WOOM_APP_PATH=""
export WOOM_TASK_PATH="2023-08-01T00:00:00+00:00/gtask3"
export WOOM_CYCLE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_LABEL="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_TOKEN="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST="1"
export WOOM_CYCLE_IS_LAST="0"
export WOOM_CYCLE_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_PREV=""
export WOOM_CYCLE_BEGIN_DATE_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_LABEL_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_TOKEN_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_DATE_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST_NEXT="0"
export WOOM_CYCLE_IS_LAST_NEXT="0"
export WOOM_CYCLE_NEXT_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_PREV_NEXT="2023-08-01T00:00:00+00:00"
export WOOM_NMEMBERS="0"
export WOOM_WORKFLOW_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages"
export WOOM_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/gtask3"
export WOOM_LOG_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/log"
export WOOM_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/gtask3/job.sh"
export PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:$PATH
export PYTHONPATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:$PYTHONPATH
export LIBRARY_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:$LIBRARY_PATH
export INCLUDE_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:$INCLUDE_PATH
# Go to run dir
mkdir -p /home/docs/woom/scratch/woom/2023-08-01T00:00:00+00:00/gtask3 && cd /home/docs/woom/scratch/woom/2023-08-01T00:00:00+00:00/gtask3
# Run the commandline(s)
echo gtask3 $WOOM_CYCLE_TOKEN > gtask3.out >> $WOOM_WORKFLOW_DIR/workflow.out
--------------------------------------------------
woom.workflow: INFO Submitted task: cycles/cycles0/gtask3 with job id 651622 depending on [264698]
woom.workflow: DEBUG Entering sequence: cycles1
woom.workflow: DEBUG Running task: cycles/cycles1/ctask2
woom.workflow: DEBUG Cleaning task: cycles/cycles1/ctask2
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask2/job.sh
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask2/job.err
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask2/job.out
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask2/job.json
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask2/job.status
woom.workflow: DEBUG Submitting task: cycles/cycles1/ctask2
woom.workflow: DEBUG Dependencies: 661889, 462915, 651622
woom.workflow: DEBUG Fake submission:
--------------- submission command ---------------
bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask2/job.sh
-------------- batch script content --------------
#!/bin/bash
# Prolog
set -eo pipefail
on_exit() {
status=$?
echo $status > "$WOOM_SUBMISSION_DIR/job.status"
exit $status
}
trap on_exit EXIT
# Environment variables
export WOOM_TASK_NAME="ctask2"
export WOOM_RUN_DIR="/home/docs/woom/scratch/woom/2023-08-01T00:00:00+00:00/ctask2"
export WOOM_APP_NAME=""
export WOOM_APP_CONF=""
export WOOM_APP_EXP=""
export WOOM_CYCLES_BEGIN_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLES_END_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLES_ROUND="1D"
export WOOM_CYCLES_FREQ="1D"
export WOOM_CYCLES_INDEP="1"
export WOOM_CYCLES_AS_INTERVALS="0"
export WOOM_CYCLES_NCYCLES="0"
export WOOM_APP_PATH=""
export WOOM_TASK_PATH="2023-08-01T00:00:00+00:00/ctask2"
export WOOM_CYCLE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_LABEL="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_TOKEN="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST="1"
export WOOM_CYCLE_IS_LAST="0"
export WOOM_CYCLE_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_PREV=""
export WOOM_CYCLE_BEGIN_DATE_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_LABEL_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_TOKEN_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_DATE_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST_NEXT="0"
export WOOM_CYCLE_IS_LAST_NEXT="0"
export WOOM_CYCLE_NEXT_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_PREV_NEXT="2023-08-01T00:00:00+00:00"
export WOOM_NMEMBERS="0"
export WOOM_WORKFLOW_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages"
export WOOM_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask2"
export WOOM_LOG_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/log"
export WOOM_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask2/job.sh"
export PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:$PATH
export PYTHONPATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:$PYTHONPATH
export LIBRARY_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:$LIBRARY_PATH
export INCLUDE_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:$INCLUDE_PATH
# Go to run dir
mkdir -p /home/docs/woom/scratch/woom/2023-08-01T00:00:00+00:00/ctask2 && cd /home/docs/woom/scratch/woom/2023-08-01T00:00:00+00:00/ctask2
# Run the commandline(s)
echo ctask2 $WOOM_CYCLE_TOKEN> ctask2.out >> $WOOM_WORKFLOW_DIR/workflow.out
--------------------------------------------------
woom.workflow: INFO Submitted task: cycles/cycles1/ctask2 with job id 70568 depending on [661889, 462915, 651622]
woom.workflow: DEBUG Running task: cycles/cycles1/ctask3
woom.workflow: DEBUG Cleaning task: cycles/cycles1/ctask3
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask3/job.sh
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask3/job.err
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask3/job.out
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask3/job.json
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask3/job.status
woom.workflow: DEBUG Submitting task: cycles/cycles1/ctask3
woom.workflow: DEBUG Dependencies: 661889, 462915, 651622
woom.workflow: DEBUG Fake submission:
--------------- submission command ---------------
bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask3/job.sh
-------------- batch script content --------------
#!/bin/bash
# Prolog
set -eo pipefail
on_exit() {
status=$?
echo $status > "$WOOM_SUBMISSION_DIR/job.status"
exit $status
}
trap on_exit EXIT
# Environment variables
export WOOM_TASK_NAME="ctask3"
export WOOM_RUN_DIR="/home/docs/woom/scratch/woom/2023-08-01T00:00:00+00:00/ctask3"
export WOOM_APP_NAME=""
export WOOM_APP_CONF=""
export WOOM_APP_EXP=""
export WOOM_CYCLES_BEGIN_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLES_END_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLES_ROUND="1D"
export WOOM_CYCLES_FREQ="1D"
export WOOM_CYCLES_INDEP="1"
export WOOM_CYCLES_AS_INTERVALS="0"
export WOOM_CYCLES_NCYCLES="0"
export WOOM_APP_PATH=""
export WOOM_TASK_PATH="2023-08-01T00:00:00+00:00/ctask3"
export WOOM_CYCLE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_LABEL="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_TOKEN="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST="1"
export WOOM_CYCLE_IS_LAST="0"
export WOOM_CYCLE_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_PREV=""
export WOOM_CYCLE_BEGIN_DATE_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_LABEL_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_TOKEN_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_DATE_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST_NEXT="0"
export WOOM_CYCLE_IS_LAST_NEXT="0"
export WOOM_CYCLE_NEXT_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_PREV_NEXT="2023-08-01T00:00:00+00:00"
export WOOM_NMEMBERS="0"
export WOOM_WORKFLOW_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages"
export WOOM_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask3"
export WOOM_LOG_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/log"
export WOOM_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask3/job.sh"
export PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:$PATH
export PYTHONPATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:$PYTHONPATH
export LIBRARY_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:$LIBRARY_PATH
export INCLUDE_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:$INCLUDE_PATH
# Go to run dir
mkdir -p /home/docs/woom/scratch/woom/2023-08-01T00:00:00+00:00/ctask3 && cd /home/docs/woom/scratch/woom/2023-08-01T00:00:00+00:00/ctask3
# Run the commandline(s)
echo ctask3 $WOOM_CYCLE_TOKEN > ctask3.out >> $WOOM_WORKFLOW_DIR/workflow.out
--------------------------------------------------
woom.workflow: INFO Submitted task: cycles/cycles1/ctask3 with job id 274130 depending on [661889, 462915, 651622]
woom.workflow: INFO Successfully submitted cycle: 2023-08-01T00:00:00+00:00
woom.workflow: DEBUG Running cycle: 2023-08-02T00:00:00+00:00
woom.workflow: DEBUG Entering sequence: cycles0
woom.workflow: DEBUG Running task: cycles/cycles0/ctask0
woom.workflow: DEBUG Cleaning task: cycles/cycles0/ctask0
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask0/job.sh
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask0/job.err
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask0/job.out
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask0/job.json
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask0/job.status
woom.workflow: DEBUG Submitting task: cycles/cycles0/ctask0
woom.workflow: DEBUG Dependencies: 166833, 868657
woom.workflow: DEBUG Fake submission:
--------------- submission command ---------------
bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask0/job.sh
-------------- batch script content --------------
#!/bin/bash
# Prolog
set -eo pipefail
on_exit() {
status=$?
echo $status > "$WOOM_SUBMISSION_DIR/job.status"
exit $status
}
trap on_exit EXIT
# Environment variables
export WOOM_TASK_NAME="ctask0"
export WOOM_RUN_DIR="/home/docs/woom/scratch/woom/2023-08-02T00:00:00+00:00/ctask0"
export WOOM_APP_NAME=""
export WOOM_APP_CONF=""
export WOOM_APP_EXP=""
export WOOM_CYCLES_BEGIN_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLES_END_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLES_ROUND="1D"
export WOOM_CYCLES_FREQ="1D"
export WOOM_CYCLES_INDEP="1"
export WOOM_CYCLES_AS_INTERVALS="0"
export WOOM_CYCLES_NCYCLES="0"
export WOOM_APP_PATH=""
export WOOM_TASK_PATH="2023-08-02T00:00:00+00:00/ctask0"
export WOOM_CYCLE="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_LABEL="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_TOKEN="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_DATE="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST="0"
export WOOM_CYCLE_IS_LAST="0"
export WOOM_CYCLE_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_PREV="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_LABEL_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_TOKEN_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_DATE_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST_NEXT="0"
export WOOM_CYCLE_IS_LAST_NEXT="1"
export WOOM_CYCLE_NEXT_NEXT=""
export WOOM_CYCLE_PREV_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_NMEMBERS="0"
export WOOM_WORKFLOW_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages"
export WOOM_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask0"
export WOOM_LOG_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/log"
export WOOM_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask0/job.sh"
export WOOM_CYCLE_BEGIN_DATE_PREV="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_LABEL_PREV="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_TOKEN_PREV="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_DATE_PREV="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST_PREV="1"
export WOOM_CYCLE_IS_LAST_PREV="0"
export WOOM_CYCLE_NEXT_PREV="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_PREV_PREV=""
export PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:$PATH
export PYTHONPATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:$PYTHONPATH
export LIBRARY_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:$LIBRARY_PATH
export INCLUDE_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:$INCLUDE_PATH
# Go to run dir
mkdir -p /home/docs/woom/scratch/woom/2023-08-02T00:00:00+00:00/ctask0 && cd /home/docs/woom/scratch/woom/2023-08-02T00:00:00+00:00/ctask0
# Run the commandline(s)
sleep 5 ; echo ctask0 $WOOM_CYCLE_TOKEN > ctask0.out >> $WOOM_WORKFLOW_DIR/workflow.out
--------------------------------------------------
woom.workflow: INFO Submitted task: cycles/cycles0/ctask0 with job id 765025 depending on [166833, 868657]
woom.workflow: DEBUG Running task: cycles/cycles0/ctask1
woom.workflow: DEBUG Cleaning task: cycles/cycles0/ctask1
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask1/job.sh
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask1/job.err
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask1/job.out
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask1/job.json
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask1/job.status
woom.workflow: DEBUG Submitting task: cycles/cycles0/ctask1
woom.workflow: DEBUG Dependencies: 166833, 868657
woom.workflow: DEBUG Fake submission:
--------------- submission command ---------------
bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask1/job.sh
-------------- batch script content --------------
#!/bin/bash
# Prolog
set -eo pipefail
on_exit() {
status=$?
echo $status > "$WOOM_SUBMISSION_DIR/job.status"
exit $status
}
trap on_exit EXIT
# Environment variables
export WOOM_TASK_NAME="ctask1"
export WOOM_RUN_DIR="/home/docs/woom/scratch/woom/2023-08-02T00:00:00+00:00/ctask1"
export WOOM_APP_NAME=""
export WOOM_APP_CONF=""
export WOOM_APP_EXP=""
export WOOM_CYCLES_BEGIN_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLES_END_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLES_ROUND="1D"
export WOOM_CYCLES_FREQ="1D"
export WOOM_CYCLES_INDEP="1"
export WOOM_CYCLES_AS_INTERVALS="0"
export WOOM_CYCLES_NCYCLES="0"
export WOOM_APP_PATH=""
export WOOM_TASK_PATH="2023-08-02T00:00:00+00:00/ctask1"
export WOOM_CYCLE="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_LABEL="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_TOKEN="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_DATE="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST="0"
export WOOM_CYCLE_IS_LAST="0"
export WOOM_CYCLE_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_PREV="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_LABEL_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_TOKEN_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_DATE_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST_NEXT="0"
export WOOM_CYCLE_IS_LAST_NEXT="1"
export WOOM_CYCLE_NEXT_NEXT=""
export WOOM_CYCLE_PREV_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_NMEMBERS="0"
export WOOM_WORKFLOW_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages"
export WOOM_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask1"
export WOOM_LOG_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/log"
export WOOM_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask1/job.sh"
export WOOM_CYCLE_BEGIN_DATE_PREV="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_LABEL_PREV="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_TOKEN_PREV="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_DATE_PREV="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST_PREV="1"
export WOOM_CYCLE_IS_LAST_PREV="0"
export WOOM_CYCLE_NEXT_PREV="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_PREV_PREV=""
export PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:$PATH
export PYTHONPATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:$PYTHONPATH
export LIBRARY_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:$LIBRARY_PATH
export INCLUDE_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:$INCLUDE_PATH
# Go to run dir
mkdir -p /home/docs/woom/scratch/woom/2023-08-02T00:00:00+00:00/ctask1 && cd /home/docs/woom/scratch/woom/2023-08-02T00:00:00+00:00/ctask1
# Run the commandline(s)
echo ctask1 $WOOM_CYCLE_TOKEN > ctask1.out >> $WOOM_WORKFLOW_DIR/workflow.out
--------------------------------------------------
woom.workflow: INFO Submitted task: cycles/cycles0/ctask1 with job id 355277 depending on [166833, 868657]
woom.workflow: DEBUG Group of 2 sequential tasks:
woom.workflow: DEBUG Running task: cycles/cycles0/gtask2
woom.workflow: DEBUG Cleaning task: cycles/cycles0/gtask2
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/gtask2/job.sh
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/gtask2/job.err
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/gtask2/job.out
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/gtask2/job.json
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/gtask2/job.status
woom.workflow: DEBUG Submitting task: cycles/cycles0/gtask2
woom.workflow: DEBUG Dependencies: 166833, 868657
woom.workflow: DEBUG Fake submission:
--------------- submission command ---------------
bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/gtask2/job.sh
-------------- batch script content --------------
#!/bin/bash
# Prolog
set -eo pipefail
on_exit() {
status=$?
echo $status > "$WOOM_SUBMISSION_DIR/job.status"
exit $status
}
trap on_exit EXIT
# Environment variables
export WOOM_TASK_NAME="gtask2"
export WOOM_RUN_DIR="/home/docs/woom/scratch/woom/2023-08-02T00:00:00+00:00/gtask2"
export WOOM_APP_NAME=""
export WOOM_APP_CONF=""
export WOOM_APP_EXP=""
export WOOM_CYCLES_BEGIN_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLES_END_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLES_ROUND="1D"
export WOOM_CYCLES_FREQ="1D"
export WOOM_CYCLES_INDEP="1"
export WOOM_CYCLES_AS_INTERVALS="0"
export WOOM_CYCLES_NCYCLES="0"
export WOOM_APP_PATH=""
export WOOM_TASK_PATH="2023-08-02T00:00:00+00:00/gtask2"
export WOOM_CYCLE="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_LABEL="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_TOKEN="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_DATE="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST="0"
export WOOM_CYCLE_IS_LAST="0"
export WOOM_CYCLE_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_PREV="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_LABEL_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_TOKEN_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_DATE_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST_NEXT="0"
export WOOM_CYCLE_IS_LAST_NEXT="1"
export WOOM_CYCLE_NEXT_NEXT=""
export WOOM_CYCLE_PREV_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_NMEMBERS="0"
export WOOM_WORKFLOW_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages"
export WOOM_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/gtask2"
export WOOM_LOG_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/log"
export WOOM_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/gtask2/job.sh"
export WOOM_CYCLE_BEGIN_DATE_PREV="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_LABEL_PREV="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_TOKEN_PREV="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_DATE_PREV="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST_PREV="1"
export WOOM_CYCLE_IS_LAST_PREV="0"
export WOOM_CYCLE_NEXT_PREV="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_PREV_PREV=""
export PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:$PATH
export PYTHONPATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:$PYTHONPATH
export LIBRARY_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:$LIBRARY_PATH
export INCLUDE_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:$INCLUDE_PATH
# Go to run dir
mkdir -p /home/docs/woom/scratch/woom/2023-08-02T00:00:00+00:00/gtask2 && cd /home/docs/woom/scratch/woom/2023-08-02T00:00:00+00:00/gtask2
# Run the commandline(s)
echo gtask2 $WOOM_CYCLE_TOKEN > gtask2.out >> $WOOM_WORKFLOW_DIR/workflow.out
--------------------------------------------------
woom.workflow: INFO Submitted task: cycles/cycles0/gtask2 with job id 446259 depending on [166833, 868657]
woom.workflow: DEBUG Running task: cycles/cycles0/gtask3
woom.workflow: DEBUG Cleaning task: cycles/cycles0/gtask3
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/gtask3/job.sh
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/gtask3/job.err
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/gtask3/job.out
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/gtask3/job.json
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/gtask3/job.status
woom.workflow: DEBUG Submitting task: cycles/cycles0/gtask3
woom.workflow: DEBUG Dependencies: 446259
woom.workflow: DEBUG Fake submission:
--------------- submission command ---------------
bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/gtask3/job.sh
-------------- batch script content --------------
#!/bin/bash
# Prolog
set -eo pipefail
on_exit() {
status=$?
echo $status > "$WOOM_SUBMISSION_DIR/job.status"
exit $status
}
trap on_exit EXIT
# Environment variables
export WOOM_TASK_NAME="gtask3"
export WOOM_RUN_DIR="/home/docs/woom/scratch/woom/2023-08-02T00:00:00+00:00/gtask3"
export WOOM_APP_NAME=""
export WOOM_APP_CONF=""
export WOOM_APP_EXP=""
export WOOM_CYCLES_BEGIN_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLES_END_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLES_ROUND="1D"
export WOOM_CYCLES_FREQ="1D"
export WOOM_CYCLES_INDEP="1"
export WOOM_CYCLES_AS_INTERVALS="0"
export WOOM_CYCLES_NCYCLES="0"
export WOOM_APP_PATH=""
export WOOM_TASK_PATH="2023-08-02T00:00:00+00:00/gtask3"
export WOOM_CYCLE="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_LABEL="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_TOKEN="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_DATE="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST="0"
export WOOM_CYCLE_IS_LAST="0"
export WOOM_CYCLE_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_PREV="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_LABEL_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_TOKEN_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_DATE_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST_NEXT="0"
export WOOM_CYCLE_IS_LAST_NEXT="1"
export WOOM_CYCLE_NEXT_NEXT=""
export WOOM_CYCLE_PREV_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_NMEMBERS="0"
export WOOM_WORKFLOW_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages"
export WOOM_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/gtask3"
export WOOM_LOG_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/log"
export WOOM_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/gtask3/job.sh"
export WOOM_CYCLE_BEGIN_DATE_PREV="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_LABEL_PREV="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_TOKEN_PREV="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_DATE_PREV="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST_PREV="1"
export WOOM_CYCLE_IS_LAST_PREV="0"
export WOOM_CYCLE_NEXT_PREV="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_PREV_PREV=""
export PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:$PATH
export PYTHONPATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:$PYTHONPATH
export LIBRARY_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:$LIBRARY_PATH
export INCLUDE_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:$INCLUDE_PATH
# Go to run dir
mkdir -p /home/docs/woom/scratch/woom/2023-08-02T00:00:00+00:00/gtask3 && cd /home/docs/woom/scratch/woom/2023-08-02T00:00:00+00:00/gtask3
# Run the commandline(s)
echo gtask3 $WOOM_CYCLE_TOKEN > gtask3.out >> $WOOM_WORKFLOW_DIR/workflow.out
--------------------------------------------------
woom.workflow: INFO Submitted task: cycles/cycles0/gtask3 with job id 470594 depending on [446259]
woom.workflow: DEBUG Entering sequence: cycles1
woom.workflow: DEBUG Running task: cycles/cycles1/ctask2
woom.workflow: DEBUG Cleaning task: cycles/cycles1/ctask2
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask2/job.sh
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask2/job.err
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask2/job.out
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask2/job.json
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask2/job.status
woom.workflow: DEBUG Submitting task: cycles/cycles1/ctask2
woom.workflow: DEBUG Dependencies: 765025, 355277, 470594
woom.workflow: DEBUG Fake submission:
--------------- submission command ---------------
bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask2/job.sh
-------------- batch script content --------------
#!/bin/bash
# Prolog
set -eo pipefail
on_exit() {
status=$?
echo $status > "$WOOM_SUBMISSION_DIR/job.status"
exit $status
}
trap on_exit EXIT
# Environment variables
export WOOM_TASK_NAME="ctask2"
export WOOM_RUN_DIR="/home/docs/woom/scratch/woom/2023-08-02T00:00:00+00:00/ctask2"
export WOOM_APP_NAME=""
export WOOM_APP_CONF=""
export WOOM_APP_EXP=""
export WOOM_CYCLES_BEGIN_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLES_END_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLES_ROUND="1D"
export WOOM_CYCLES_FREQ="1D"
export WOOM_CYCLES_INDEP="1"
export WOOM_CYCLES_AS_INTERVALS="0"
export WOOM_CYCLES_NCYCLES="0"
export WOOM_APP_PATH=""
export WOOM_TASK_PATH="2023-08-02T00:00:00+00:00/ctask2"
export WOOM_CYCLE="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_LABEL="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_TOKEN="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_DATE="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST="0"
export WOOM_CYCLE_IS_LAST="0"
export WOOM_CYCLE_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_PREV="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_LABEL_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_TOKEN_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_DATE_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST_NEXT="0"
export WOOM_CYCLE_IS_LAST_NEXT="1"
export WOOM_CYCLE_NEXT_NEXT=""
export WOOM_CYCLE_PREV_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_NMEMBERS="0"
export WOOM_WORKFLOW_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages"
export WOOM_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask2"
export WOOM_LOG_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/log"
export WOOM_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask2/job.sh"
export WOOM_CYCLE_BEGIN_DATE_PREV="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_LABEL_PREV="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_TOKEN_PREV="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_DATE_PREV="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST_PREV="1"
export WOOM_CYCLE_IS_LAST_PREV="0"
export WOOM_CYCLE_NEXT_PREV="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_PREV_PREV=""
export PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:$PATH
export PYTHONPATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:$PYTHONPATH
export LIBRARY_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:$LIBRARY_PATH
export INCLUDE_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:$INCLUDE_PATH
# Go to run dir
mkdir -p /home/docs/woom/scratch/woom/2023-08-02T00:00:00+00:00/ctask2 && cd /home/docs/woom/scratch/woom/2023-08-02T00:00:00+00:00/ctask2
# Run the commandline(s)
echo ctask2 $WOOM_CYCLE_TOKEN> ctask2.out >> $WOOM_WORKFLOW_DIR/workflow.out
--------------------------------------------------
woom.workflow: INFO Submitted task: cycles/cycles1/ctask2 with job id 401586 depending on [765025, 355277, 470594]
woom.workflow: DEBUG Running task: cycles/cycles1/ctask3
woom.workflow: DEBUG Cleaning task: cycles/cycles1/ctask3
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask3/job.sh
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask3/job.err
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask3/job.out
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask3/job.json
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask3/job.status
woom.workflow: DEBUG Submitting task: cycles/cycles1/ctask3
woom.workflow: DEBUG Dependencies: 765025, 355277, 470594
woom.workflow: DEBUG Fake submission:
--------------- submission command ---------------
bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask3/job.sh
-------------- batch script content --------------
#!/bin/bash
# Prolog
set -eo pipefail
on_exit() {
status=$?
echo $status > "$WOOM_SUBMISSION_DIR/job.status"
exit $status
}
trap on_exit EXIT
# Environment variables
export WOOM_TASK_NAME="ctask3"
export WOOM_RUN_DIR="/home/docs/woom/scratch/woom/2023-08-02T00:00:00+00:00/ctask3"
export WOOM_APP_NAME=""
export WOOM_APP_CONF=""
export WOOM_APP_EXP=""
export WOOM_CYCLES_BEGIN_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLES_END_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLES_ROUND="1D"
export WOOM_CYCLES_FREQ="1D"
export WOOM_CYCLES_INDEP="1"
export WOOM_CYCLES_AS_INTERVALS="0"
export WOOM_CYCLES_NCYCLES="0"
export WOOM_APP_PATH=""
export WOOM_TASK_PATH="2023-08-02T00:00:00+00:00/ctask3"
export WOOM_CYCLE="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_LABEL="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_TOKEN="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_DATE="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST="0"
export WOOM_CYCLE_IS_LAST="0"
export WOOM_CYCLE_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_PREV="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_LABEL_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_TOKEN_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_DATE_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST_NEXT="0"
export WOOM_CYCLE_IS_LAST_NEXT="1"
export WOOM_CYCLE_NEXT_NEXT=""
export WOOM_CYCLE_PREV_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_NMEMBERS="0"
export WOOM_WORKFLOW_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages"
export WOOM_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask3"
export WOOM_LOG_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/log"
export WOOM_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask3/job.sh"
export WOOM_CYCLE_BEGIN_DATE_PREV="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_LABEL_PREV="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_TOKEN_PREV="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_DATE_PREV="2023-08-01T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST_PREV="1"
export WOOM_CYCLE_IS_LAST_PREV="0"
export WOOM_CYCLE_NEXT_PREV="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_PREV_PREV=""
export PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:$PATH
export PYTHONPATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:$PYTHONPATH
export LIBRARY_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:$LIBRARY_PATH
export INCLUDE_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:$INCLUDE_PATH
# Go to run dir
mkdir -p /home/docs/woom/scratch/woom/2023-08-02T00:00:00+00:00/ctask3 && cd /home/docs/woom/scratch/woom/2023-08-02T00:00:00+00:00/ctask3
# Run the commandline(s)
echo ctask3 $WOOM_CYCLE_TOKEN > ctask3.out >> $WOOM_WORKFLOW_DIR/workflow.out
--------------------------------------------------
woom.workflow: INFO Submitted task: cycles/cycles1/ctask3 with job id 814755 depending on [765025, 355277, 470594]
woom.workflow: INFO Successfully submitted cycle: 2023-08-02T00:00:00+00:00
woom.workflow: DEBUG Running cycle: 2023-08-03T00:00:00+00:00
woom.workflow: DEBUG Entering sequence: cycles0
woom.workflow: DEBUG Running task: cycles/cycles0/ctask0
woom.workflow: DEBUG Cleaning task: cycles/cycles0/ctask0
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask0/job.sh
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask0/job.err
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask0/job.out
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask0/job.json
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask0/job.status
woom.workflow: DEBUG Submitting task: cycles/cycles0/ctask0
woom.workflow: DEBUG Dependencies: 166833, 868657
woom.workflow: DEBUG Fake submission:
--------------- submission command ---------------
bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask0/job.sh
-------------- batch script content --------------
#!/bin/bash
# Prolog
set -eo pipefail
on_exit() {
status=$?
echo $status > "$WOOM_SUBMISSION_DIR/job.status"
exit $status
}
trap on_exit EXIT
# Environment variables
export WOOM_TASK_NAME="ctask0"
export WOOM_RUN_DIR="/home/docs/woom/scratch/woom/2023-08-03T00:00:00+00:00/ctask0"
export WOOM_APP_NAME=""
export WOOM_APP_CONF=""
export WOOM_APP_EXP=""
export WOOM_CYCLES_BEGIN_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLES_END_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLES_ROUND="1D"
export WOOM_CYCLES_FREQ="1D"
export WOOM_CYCLES_INDEP="1"
export WOOM_CYCLES_AS_INTERVALS="0"
export WOOM_CYCLES_NCYCLES="0"
export WOOM_APP_PATH=""
export WOOM_TASK_PATH="2023-08-03T00:00:00+00:00/ctask0"
export WOOM_CYCLE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_LABEL="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_TOKEN="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST="0"
export WOOM_CYCLE_IS_LAST="1"
export WOOM_CYCLE_NEXT=""
export WOOM_CYCLE_PREV="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_LABEL_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_TOKEN_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_DATE_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST_NEXT="0"
export WOOM_CYCLE_IS_LAST_NEXT="1"
export WOOM_CYCLE_NEXT_NEXT=""
export WOOM_CYCLE_PREV_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_NMEMBERS="0"
export WOOM_WORKFLOW_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages"
export WOOM_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask0"
export WOOM_LOG_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/log"
export WOOM_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask0/job.sh"
export WOOM_CYCLE_BEGIN_DATE_PREV="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_LABEL_PREV="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_TOKEN_PREV="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_DATE_PREV="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST_PREV="0"
export WOOM_CYCLE_IS_LAST_PREV="0"
export WOOM_CYCLE_NEXT_PREV="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_PREV_PREV="2023-08-01T00:00:00+00:00"
export PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:$PATH
export PYTHONPATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:$PYTHONPATH
export LIBRARY_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:$LIBRARY_PATH
export INCLUDE_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:$INCLUDE_PATH
# Go to run dir
mkdir -p /home/docs/woom/scratch/woom/2023-08-03T00:00:00+00:00/ctask0 && cd /home/docs/woom/scratch/woom/2023-08-03T00:00:00+00:00/ctask0
# Run the commandline(s)
sleep 5 ; echo ctask0 $WOOM_CYCLE_TOKEN > ctask0.out >> $WOOM_WORKFLOW_DIR/workflow.out
--------------------------------------------------
woom.workflow: INFO Submitted task: cycles/cycles0/ctask0 with job id 716240 depending on [166833, 868657]
woom.workflow: DEBUG Running task: cycles/cycles0/ctask1
woom.workflow: DEBUG Cleaning task: cycles/cycles0/ctask1
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask1/job.sh
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask1/job.err
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask1/job.out
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask1/job.json
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask1/job.status
woom.workflow: DEBUG Submitting task: cycles/cycles0/ctask1
woom.workflow: DEBUG Dependencies: 166833, 868657
woom.workflow: DEBUG Fake submission:
--------------- submission command ---------------
bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask1/job.sh
-------------- batch script content --------------
#!/bin/bash
# Prolog
set -eo pipefail
on_exit() {
status=$?
echo $status > "$WOOM_SUBMISSION_DIR/job.status"
exit $status
}
trap on_exit EXIT
# Environment variables
export WOOM_TASK_NAME="ctask1"
export WOOM_RUN_DIR="/home/docs/woom/scratch/woom/2023-08-03T00:00:00+00:00/ctask1"
export WOOM_APP_NAME=""
export WOOM_APP_CONF=""
export WOOM_APP_EXP=""
export WOOM_CYCLES_BEGIN_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLES_END_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLES_ROUND="1D"
export WOOM_CYCLES_FREQ="1D"
export WOOM_CYCLES_INDEP="1"
export WOOM_CYCLES_AS_INTERVALS="0"
export WOOM_CYCLES_NCYCLES="0"
export WOOM_APP_PATH=""
export WOOM_TASK_PATH="2023-08-03T00:00:00+00:00/ctask1"
export WOOM_CYCLE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_LABEL="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_TOKEN="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST="0"
export WOOM_CYCLE_IS_LAST="1"
export WOOM_CYCLE_NEXT=""
export WOOM_CYCLE_PREV="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_LABEL_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_TOKEN_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_DATE_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST_NEXT="0"
export WOOM_CYCLE_IS_LAST_NEXT="1"
export WOOM_CYCLE_NEXT_NEXT=""
export WOOM_CYCLE_PREV_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_NMEMBERS="0"
export WOOM_WORKFLOW_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages"
export WOOM_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask1"
export WOOM_LOG_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/log"
export WOOM_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask1/job.sh"
export WOOM_CYCLE_BEGIN_DATE_PREV="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_LABEL_PREV="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_TOKEN_PREV="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_DATE_PREV="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST_PREV="0"
export WOOM_CYCLE_IS_LAST_PREV="0"
export WOOM_CYCLE_NEXT_PREV="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_PREV_PREV="2023-08-01T00:00:00+00:00"
export PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:$PATH
export PYTHONPATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:$PYTHONPATH
export LIBRARY_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:$LIBRARY_PATH
export INCLUDE_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:$INCLUDE_PATH
# Go to run dir
mkdir -p /home/docs/woom/scratch/woom/2023-08-03T00:00:00+00:00/ctask1 && cd /home/docs/woom/scratch/woom/2023-08-03T00:00:00+00:00/ctask1
# Run the commandline(s)
echo ctask1 $WOOM_CYCLE_TOKEN > ctask1.out >> $WOOM_WORKFLOW_DIR/workflow.out
--------------------------------------------------
woom.workflow: INFO Submitted task: cycles/cycles0/ctask1 with job id 929988 depending on [166833, 868657]
woom.workflow: DEBUG Group of 2 sequential tasks:
woom.workflow: DEBUG Running task: cycles/cycles0/gtask2
woom.workflow: DEBUG Cleaning task: cycles/cycles0/gtask2
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/gtask2/job.sh
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/gtask2/job.err
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/gtask2/job.out
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/gtask2/job.json
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/gtask2/job.status
woom.workflow: DEBUG Submitting task: cycles/cycles0/gtask2
woom.workflow: DEBUG Dependencies: 166833, 868657
woom.workflow: DEBUG Fake submission:
--------------- submission command ---------------
bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/gtask2/job.sh
-------------- batch script content --------------
#!/bin/bash
# Prolog
set -eo pipefail
on_exit() {
status=$?
echo $status > "$WOOM_SUBMISSION_DIR/job.status"
exit $status
}
trap on_exit EXIT
# Environment variables
export WOOM_TASK_NAME="gtask2"
export WOOM_RUN_DIR="/home/docs/woom/scratch/woom/2023-08-03T00:00:00+00:00/gtask2"
export WOOM_APP_NAME=""
export WOOM_APP_CONF=""
export WOOM_APP_EXP=""
export WOOM_CYCLES_BEGIN_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLES_END_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLES_ROUND="1D"
export WOOM_CYCLES_FREQ="1D"
export WOOM_CYCLES_INDEP="1"
export WOOM_CYCLES_AS_INTERVALS="0"
export WOOM_CYCLES_NCYCLES="0"
export WOOM_APP_PATH=""
export WOOM_TASK_PATH="2023-08-03T00:00:00+00:00/gtask2"
export WOOM_CYCLE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_LABEL="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_TOKEN="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST="0"
export WOOM_CYCLE_IS_LAST="1"
export WOOM_CYCLE_NEXT=""
export WOOM_CYCLE_PREV="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_LABEL_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_TOKEN_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_DATE_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST_NEXT="0"
export WOOM_CYCLE_IS_LAST_NEXT="1"
export WOOM_CYCLE_NEXT_NEXT=""
export WOOM_CYCLE_PREV_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_NMEMBERS="0"
export WOOM_WORKFLOW_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages"
export WOOM_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/gtask2"
export WOOM_LOG_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/log"
export WOOM_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/gtask2/job.sh"
export WOOM_CYCLE_BEGIN_DATE_PREV="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_LABEL_PREV="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_TOKEN_PREV="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_DATE_PREV="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST_PREV="0"
export WOOM_CYCLE_IS_LAST_PREV="0"
export WOOM_CYCLE_NEXT_PREV="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_PREV_PREV="2023-08-01T00:00:00+00:00"
export PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:$PATH
export PYTHONPATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:$PYTHONPATH
export LIBRARY_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:$LIBRARY_PATH
export INCLUDE_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:$INCLUDE_PATH
# Go to run dir
mkdir -p /home/docs/woom/scratch/woom/2023-08-03T00:00:00+00:00/gtask2 && cd /home/docs/woom/scratch/woom/2023-08-03T00:00:00+00:00/gtask2
# Run the commandline(s)
echo gtask2 $WOOM_CYCLE_TOKEN > gtask2.out >> $WOOM_WORKFLOW_DIR/workflow.out
--------------------------------------------------
woom.workflow: INFO Submitted task: cycles/cycles0/gtask2 with job id 20952 depending on [166833, 868657]
woom.workflow: DEBUG Running task: cycles/cycles0/gtask3
woom.workflow: DEBUG Cleaning task: cycles/cycles0/gtask3
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/gtask3/job.sh
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/gtask3/job.err
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/gtask3/job.out
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/gtask3/job.json
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/gtask3/job.status
woom.workflow: DEBUG Submitting task: cycles/cycles0/gtask3
woom.workflow: DEBUG Dependencies: 20952
woom.workflow: DEBUG Fake submission:
--------------- submission command ---------------
bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/gtask3/job.sh
-------------- batch script content --------------
#!/bin/bash
# Prolog
set -eo pipefail
on_exit() {
status=$?
echo $status > "$WOOM_SUBMISSION_DIR/job.status"
exit $status
}
trap on_exit EXIT
# Environment variables
export WOOM_TASK_NAME="gtask3"
export WOOM_RUN_DIR="/home/docs/woom/scratch/woom/2023-08-03T00:00:00+00:00/gtask3"
export WOOM_APP_NAME=""
export WOOM_APP_CONF=""
export WOOM_APP_EXP=""
export WOOM_CYCLES_BEGIN_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLES_END_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLES_ROUND="1D"
export WOOM_CYCLES_FREQ="1D"
export WOOM_CYCLES_INDEP="1"
export WOOM_CYCLES_AS_INTERVALS="0"
export WOOM_CYCLES_NCYCLES="0"
export WOOM_APP_PATH=""
export WOOM_TASK_PATH="2023-08-03T00:00:00+00:00/gtask3"
export WOOM_CYCLE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_LABEL="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_TOKEN="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST="0"
export WOOM_CYCLE_IS_LAST="1"
export WOOM_CYCLE_NEXT=""
export WOOM_CYCLE_PREV="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_LABEL_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_TOKEN_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_DATE_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST_NEXT="0"
export WOOM_CYCLE_IS_LAST_NEXT="1"
export WOOM_CYCLE_NEXT_NEXT=""
export WOOM_CYCLE_PREV_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_NMEMBERS="0"
export WOOM_WORKFLOW_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages"
export WOOM_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/gtask3"
export WOOM_LOG_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/log"
export WOOM_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/gtask3/job.sh"
export WOOM_CYCLE_BEGIN_DATE_PREV="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_LABEL_PREV="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_TOKEN_PREV="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_DATE_PREV="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST_PREV="0"
export WOOM_CYCLE_IS_LAST_PREV="0"
export WOOM_CYCLE_NEXT_PREV="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_PREV_PREV="2023-08-01T00:00:00+00:00"
export PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:$PATH
export PYTHONPATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:$PYTHONPATH
export LIBRARY_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:$LIBRARY_PATH
export INCLUDE_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:$INCLUDE_PATH
# Go to run dir
mkdir -p /home/docs/woom/scratch/woom/2023-08-03T00:00:00+00:00/gtask3 && cd /home/docs/woom/scratch/woom/2023-08-03T00:00:00+00:00/gtask3
# Run the commandline(s)
echo gtask3 $WOOM_CYCLE_TOKEN > gtask3.out >> $WOOM_WORKFLOW_DIR/workflow.out
--------------------------------------------------
woom.workflow: INFO Submitted task: cycles/cycles0/gtask3 with job id 18423 depending on [20952]
woom.workflow: DEBUG Entering sequence: cycles1
woom.workflow: DEBUG Running task: cycles/cycles1/ctask2
woom.workflow: DEBUG Cleaning task: cycles/cycles1/ctask2
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask2/job.sh
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask2/job.err
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask2/job.out
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask2/job.json
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask2/job.status
woom.workflow: DEBUG Submitting task: cycles/cycles1/ctask2
woom.workflow: DEBUG Dependencies: 716240, 929988, 18423
woom.workflow: DEBUG Fake submission:
--------------- submission command ---------------
bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask2/job.sh
-------------- batch script content --------------
#!/bin/bash
# Prolog
set -eo pipefail
on_exit() {
status=$?
echo $status > "$WOOM_SUBMISSION_DIR/job.status"
exit $status
}
trap on_exit EXIT
# Environment variables
export WOOM_TASK_NAME="ctask2"
export WOOM_RUN_DIR="/home/docs/woom/scratch/woom/2023-08-03T00:00:00+00:00/ctask2"
export WOOM_APP_NAME=""
export WOOM_APP_CONF=""
export WOOM_APP_EXP=""
export WOOM_CYCLES_BEGIN_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLES_END_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLES_ROUND="1D"
export WOOM_CYCLES_FREQ="1D"
export WOOM_CYCLES_INDEP="1"
export WOOM_CYCLES_AS_INTERVALS="0"
export WOOM_CYCLES_NCYCLES="0"
export WOOM_APP_PATH=""
export WOOM_TASK_PATH="2023-08-03T00:00:00+00:00/ctask2"
export WOOM_CYCLE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_LABEL="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_TOKEN="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST="0"
export WOOM_CYCLE_IS_LAST="1"
export WOOM_CYCLE_NEXT=""
export WOOM_CYCLE_PREV="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_LABEL_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_TOKEN_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_DATE_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST_NEXT="0"
export WOOM_CYCLE_IS_LAST_NEXT="1"
export WOOM_CYCLE_NEXT_NEXT=""
export WOOM_CYCLE_PREV_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_NMEMBERS="0"
export WOOM_WORKFLOW_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages"
export WOOM_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask2"
export WOOM_LOG_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/log"
export WOOM_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask2/job.sh"
export WOOM_CYCLE_BEGIN_DATE_PREV="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_LABEL_PREV="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_TOKEN_PREV="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_DATE_PREV="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST_PREV="0"
export WOOM_CYCLE_IS_LAST_PREV="0"
export WOOM_CYCLE_NEXT_PREV="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_PREV_PREV="2023-08-01T00:00:00+00:00"
export PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:$PATH
export PYTHONPATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:$PYTHONPATH
export LIBRARY_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:$LIBRARY_PATH
export INCLUDE_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:$INCLUDE_PATH
# Go to run dir
mkdir -p /home/docs/woom/scratch/woom/2023-08-03T00:00:00+00:00/ctask2 && cd /home/docs/woom/scratch/woom/2023-08-03T00:00:00+00:00/ctask2
# Run the commandline(s)
echo ctask2 $WOOM_CYCLE_TOKEN> ctask2.out >> $WOOM_WORKFLOW_DIR/workflow.out
--------------------------------------------------
woom.workflow: INFO Submitted task: cycles/cycles1/ctask2 with job id 883386 depending on [716240, 929988, 18423]
woom.workflow: DEBUG Running task: cycles/cycles1/ctask3
woom.workflow: DEBUG Cleaning task: cycles/cycles1/ctask3
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask3/job.sh
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask3/job.err
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask3/job.out
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask3/job.json
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask3/job.status
woom.workflow: DEBUG Submitting task: cycles/cycles1/ctask3
woom.workflow: DEBUG Dependencies: 716240, 929988, 18423
woom.workflow: DEBUG Fake submission:
--------------- submission command ---------------
bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask3/job.sh
-------------- batch script content --------------
#!/bin/bash
# Prolog
set -eo pipefail
on_exit() {
status=$?
echo $status > "$WOOM_SUBMISSION_DIR/job.status"
exit $status
}
trap on_exit EXIT
# Environment variables
export WOOM_TASK_NAME="ctask3"
export WOOM_RUN_DIR="/home/docs/woom/scratch/woom/2023-08-03T00:00:00+00:00/ctask3"
export WOOM_APP_NAME=""
export WOOM_APP_CONF=""
export WOOM_APP_EXP=""
export WOOM_CYCLES_BEGIN_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLES_END_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLES_ROUND="1D"
export WOOM_CYCLES_FREQ="1D"
export WOOM_CYCLES_INDEP="1"
export WOOM_CYCLES_AS_INTERVALS="0"
export WOOM_CYCLES_NCYCLES="0"
export WOOM_APP_PATH=""
export WOOM_TASK_PATH="2023-08-03T00:00:00+00:00/ctask3"
export WOOM_CYCLE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_LABEL="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_TOKEN="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST="0"
export WOOM_CYCLE_IS_LAST="1"
export WOOM_CYCLE_NEXT=""
export WOOM_CYCLE_PREV="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_LABEL_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_TOKEN_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_DATE_NEXT="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST_NEXT="0"
export WOOM_CYCLE_IS_LAST_NEXT="1"
export WOOM_CYCLE_NEXT_NEXT=""
export WOOM_CYCLE_PREV_NEXT="2023-08-02T00:00:00+00:00"
export WOOM_NMEMBERS="0"
export WOOM_WORKFLOW_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages"
export WOOM_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask3"
export WOOM_LOG_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/log"
export WOOM_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask3/job.sh"
export WOOM_CYCLE_BEGIN_DATE_PREV="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_LABEL_PREV="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_TOKEN_PREV="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_DATE_PREV="2023-08-02T00:00:00+00:00"
export WOOM_CYCLE_IS_FIRST_PREV="0"
export WOOM_CYCLE_IS_LAST_PREV="0"
export WOOM_CYCLE_NEXT_PREV="2023-08-03T00:00:00+00:00"
export WOOM_CYCLE_PREV_PREV="2023-08-01T00:00:00+00:00"
export PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:$PATH
export PYTHONPATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:$PYTHONPATH
export LIBRARY_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:$LIBRARY_PATH
export INCLUDE_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:$INCLUDE_PATH
# Go to run dir
mkdir -p /home/docs/woom/scratch/woom/2023-08-03T00:00:00+00:00/ctask3 && cd /home/docs/woom/scratch/woom/2023-08-03T00:00:00+00:00/ctask3
# Run the commandline(s)
echo ctask3 $WOOM_CYCLE_TOKEN > ctask3.out >> $WOOM_WORKFLOW_DIR/workflow.out
--------------------------------------------------
woom.workflow: INFO Submitted task: cycles/cycles1/ctask3 with job id 856823 depending on [716240, 929988, 18423]
woom.workflow: INFO Successfully submitted cycle: 2023-08-03T00:00:00+00:00
woom.workflow: DEBUG Entering stage: epilog
woom.workflow: DEBUG Entering sequence: epilog0
woom.workflow: DEBUG Running task: epilog/epilog0/etask0
woom.workflow: DEBUG Cleaning task: epilog/epilog0/etask0
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/epilog/etask0/job.sh
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/epilog/etask0/job.err
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/epilog/etask0/job.out
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/epilog/etask0/job.json
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/epilog/etask0/job.status
woom.workflow: DEBUG Submitting task: epilog/epilog0/etask0
woom.workflow: DEBUG Dependencies: 70568, 274130, 401586, 814755, 883386, 856823
woom.workflow: DEBUG Fake submission:
--------------- submission command ---------------
bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/epilog/etask0/job.sh
-------------- batch script content --------------
#!/bin/bash
# Prolog
set -eo pipefail
on_exit() {
status=$?
echo $status > "$WOOM_SUBMISSION_DIR/job.status"
exit $status
}
trap on_exit EXIT
# Environment variables
export WOOM_TASK_NAME="etask0"
export WOOM_RUN_DIR="/home/docs/woom/scratch/woom/epilog/etask0"
export WOOM_APP_NAME=""
export WOOM_APP_CONF=""
export WOOM_APP_EXP=""
export WOOM_CYCLES_BEGIN_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLES_END_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLES_ROUND="1D"
export WOOM_CYCLES_FREQ="1D"
export WOOM_CYCLES_INDEP="1"
export WOOM_CYCLES_AS_INTERVALS="0"
export WOOM_CYCLES_NCYCLES="0"
export WOOM_APP_PATH=""
export WOOM_TASK_PATH="epilog/etask0"
export WOOM_NMEMBERS="0"
export WOOM_WORKFLOW_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages"
export WOOM_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/epilog/etask0"
export WOOM_LOG_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/log"
export WOOM_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/epilog/etask0/job.sh"
export PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:$PATH
export PYTHONPATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:$PYTHONPATH
export LIBRARY_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:$LIBRARY_PATH
export INCLUDE_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:$INCLUDE_PATH
# Go to run dir
mkdir -p /home/docs/woom/scratch/woom/epilog/etask0 && cd /home/docs/woom/scratch/woom/epilog/etask0
# Run the commandline(s)
echo etask0 > etask0.out >> $WOOM_WORKFLOW_DIR/workflow.out
--------------------------------------------------
woom.workflow: INFO Submitted task: epilog/epilog0/etask0 with job id 625769 depending on [70568, 274130, 401586, 814755, 883386, 856823]
woom.workflow: DEBUG Running task: epilog/epilog0/etask1
woom.workflow: DEBUG Cleaning task: epilog/epilog0/etask1
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/epilog/etask1/job.sh
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/epilog/etask1/job.err
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/epilog/etask1/job.out
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/epilog/etask1/job.json
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/epilog/etask1/job.status
woom.workflow: DEBUG Submitting task: epilog/epilog0/etask1
woom.workflow: DEBUG Dependencies: 70568, 274130, 401586, 814755, 883386, 856823
woom.workflow: DEBUG Fake submission:
--------------- submission command ---------------
bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/epilog/etask1/job.sh
-------------- batch script content --------------
#!/bin/bash
# Prolog
set -eo pipefail
on_exit() {
status=$?
echo $status > "$WOOM_SUBMISSION_DIR/job.status"
exit $status
}
trap on_exit EXIT
# Environment variables
export WOOM_TASK_NAME="etask1"
export WOOM_RUN_DIR="/home/docs/woom/scratch/woom/epilog/etask1"
export WOOM_APP_NAME=""
export WOOM_APP_CONF=""
export WOOM_APP_EXP=""
export WOOM_CYCLES_BEGIN_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLES_END_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLES_ROUND="1D"
export WOOM_CYCLES_FREQ="1D"
export WOOM_CYCLES_INDEP="1"
export WOOM_CYCLES_AS_INTERVALS="0"
export WOOM_CYCLES_NCYCLES="0"
export WOOM_APP_PATH=""
export WOOM_TASK_PATH="epilog/etask1"
export WOOM_NMEMBERS="0"
export WOOM_WORKFLOW_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages"
export WOOM_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/epilog/etask1"
export WOOM_LOG_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/log"
export WOOM_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/epilog/etask1/job.sh"
export PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:$PATH
export PYTHONPATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:$PYTHONPATH
export LIBRARY_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:$LIBRARY_PATH
export INCLUDE_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:$INCLUDE_PATH
# Go to run dir
mkdir -p /home/docs/woom/scratch/woom/epilog/etask1 && cd /home/docs/woom/scratch/woom/epilog/etask1
# Run the commandline(s)
echo etask1 > etask1.out >> $WOOM_WORKFLOW_DIR/workflow.out
--------------------------------------------------
woom.workflow: INFO Submitted task: epilog/epilog0/etask1 with job id 38180 depending on [70568, 274130, 401586, 814755, 883386, 856823]
woom.workflow: DEBUG Entering sequence: epilog1
woom.workflow: DEBUG Running task: epilog/epilog1/etask2
woom.workflow: DEBUG Cleaning task: epilog/epilog1/etask2
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/epilog/etask2/job.sh
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/epilog/etask2/job.err
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/epilog/etask2/job.out
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/epilog/etask2/job.json
woom.workflow: DEBUG Removed: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/epilog/etask2/job.status
woom.workflow: DEBUG Submitting task: epilog/epilog1/etask2
woom.workflow: DEBUG Dependencies: 625769, 38180
woom.workflow: DEBUG Fake submission:
--------------- submission command ---------------
bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/epilog/etask2/job.sh
-------------- batch script content --------------
#!/bin/bash
# Prolog
set -eo pipefail
on_exit() {
status=$?
echo $status > "$WOOM_SUBMISSION_DIR/job.status"
exit $status
}
trap on_exit EXIT
# Environment variables
export WOOM_TASK_NAME="etask2"
export WOOM_RUN_DIR="/home/docs/woom/scratch/woom/epilog/etask2"
export WOOM_APP_NAME=""
export WOOM_APP_CONF=""
export WOOM_APP_EXP=""
export WOOM_CYCLES_BEGIN_DATE="2023-08-01T00:00:00+00:00"
export WOOM_CYCLES_END_DATE="2023-08-03T00:00:00+00:00"
export WOOM_CYCLES_ROUND="1D"
export WOOM_CYCLES_FREQ="1D"
export WOOM_CYCLES_INDEP="1"
export WOOM_CYCLES_AS_INTERVALS="0"
export WOOM_CYCLES_NCYCLES="0"
export WOOM_APP_PATH=""
export WOOM_TASK_PATH="epilog/etask2"
export WOOM_NMEMBERS="0"
export WOOM_WORKFLOW_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages"
export WOOM_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/epilog/etask2"
export WOOM_LOG_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/log"
export WOOM_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/epilog/etask2/job.sh"
export PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/bin:$PATH
export PYTHONPATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib/python:$PYTHONPATH
export LIBRARY_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/lib:$LIBRARY_PATH
export INCLUDE_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/include:$INCLUDE_PATH
# Go to run dir
mkdir -p /home/docs/woom/scratch/woom/epilog/etask2 && cd /home/docs/woom/scratch/woom/epilog/etask2
# Run the commandline(s)
echo etask2 > etask2.out >> $WOOM_WORKFLOW_DIR/workflow.out
--------------------------------------------------
woom.workflow: INFO Submitted task: epilog/epilog1/etask2 with job id 689428 depending on [625769, 38180]
woom.workflow: DEBUG Running task: epilog/epilog1/etask3
woom.cli : ERROR Workflow failed: Can't run a task that is already running. Aborting... Run 'woom kill {status.jobid}' to kill the associated job before re-running.
Traceback (most recent call last):
File "/home/docs/checkouts/readthedocs.org/user_builds/woom/envs/stable/lib/python3.11/site-packages/woom/cli.py", line 353, in main_run
workflow.run(dry=args.dry_run, update=args.update)
File "/home/docs/checkouts/readthedocs.org/user_builds/woom/envs/stable/lib/python3.11/site-packages/woom/workflow.py", line 580, in run
raise WorkFlowError(
woom.workflow.WorkFlowError: Can't run a task that is already running. Aborting... Run 'woom kill {status.jobid}' to kill the associated job before re-running.
Normal run#
And finally in run it.
$ woom run --log-no-color
woom.cli : INFO No extension to load
woom.cli : INFO Loaded workflow config
woom.cli : INFO Initialized the host manager
woom.cli : INFO Loaded hosts config file: hosts.cfg
woom.cli : INFO Infered host: local
woom.cli : INFO Initialized the task manager
woom.cli : INFO Loaded the task config file: tasks.cfg
woom.cli : INFO Initialized the workflow
woom.cli : INFO Successfully setup the workflow!
woom.workflow: INFO Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog
woom.workflow: INFO Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask0
woom.workflow: INFO Created batch script: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask0/job.sh
woom.job : INFO Started job manager: BackgroundJobManager()
woom.workflow: INFO Submitted task: prolog/prolog0/ptask0 with job id 721
woom.workflow: INFO Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask1
woom.workflow: INFO Created batch script: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask1/job.sh
woom.workflow: INFO Submitted task: prolog/prolog0/ptask1 with job id 723
woom.workflow: INFO Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/gtask0
woom.workflow: INFO Created batch script: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/gtask0/job.sh
woom.workflow: INFO Submitted task: prolog/prolog0/gtask0 with job id 725
woom.workflow: INFO Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/gtask1
woom.workflow: INFO Created batch script: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/gtask1/job.sh
woom.workflow: INFO Submitted task: prolog/prolog0/gtask1 with job id 727 depending on [725]
woom.workflow: INFO Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask2
woom.workflow: INFO Created batch script: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask2/job.sh
woom.workflow: INFO Submitted task: prolog/prolog1/ptask2 with job id 729 depending on [721, 723, 727]
woom.workflow: INFO Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask3
woom.workflow: INFO Created batch script: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/prolog/ptask3/job.sh
woom.workflow: INFO Submitted task: prolog/prolog1/ptask3 with job id 731 depending on [721, 723, 727]
woom.workflow: INFO Successfully submitted stage: prolog
woom.workflow: INFO Cycling on independant dates from 2023-08-01 00:00:00+00:00 to 2023-08-03 00:00:00+00:00 in 3 time(s)
woom.workflow: INFO Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00
woom.workflow: INFO Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask0
woom.workflow: INFO Created batch script: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask0/job.sh
woom.workflow: INFO Submitted task: cycles/cycles0/ctask0 with job id 733 depending on [729, 731]
woom.workflow: INFO Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask1
woom.workflow: INFO Created batch script: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask1/job.sh
woom.workflow: INFO Submitted task: cycles/cycles0/ctask1 with job id 736 depending on [729, 731]
woom.workflow: INFO Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/gtask2
woom.workflow: INFO Created batch script: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/gtask2/job.sh
woom.workflow: INFO Submitted task: cycles/cycles0/gtask2 with job id 738 depending on [729, 731]
woom.workflow: INFO Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/gtask3
woom.workflow: INFO Created batch script: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/gtask3/job.sh
woom.workflow: INFO Submitted task: cycles/cycles0/gtask3 with job id 740 depending on [738]
woom.workflow: INFO Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask2
woom.workflow: INFO Created batch script: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask2/job.sh
woom.workflow: INFO Submitted task: cycles/cycles1/ctask2 with job id 742 depending on [733, 736, 740]
woom.workflow: INFO Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask3
woom.workflow: INFO Created batch script: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-01T00:00:00+00:00/ctask3/job.sh
woom.workflow: INFO Submitted task: cycles/cycles1/ctask3 with job id 744 depending on [733, 736, 740]
woom.workflow: INFO Successfully submitted cycle: 2023-08-01T00:00:00+00:00
woom.workflow: INFO Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00
woom.workflow: INFO Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask0
woom.workflow: INFO Created batch script: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask0/job.sh
woom.workflow: INFO Submitted task: cycles/cycles0/ctask0 with job id 746 depending on [729, 731]
woom.workflow: INFO Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask1
woom.workflow: INFO Created batch script: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask1/job.sh
woom.workflow: INFO Submitted task: cycles/cycles0/ctask1 with job id 749 depending on [729, 731]
woom.workflow: INFO Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/gtask2
woom.workflow: INFO Created batch script: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/gtask2/job.sh
woom.workflow: INFO Submitted task: cycles/cycles0/gtask2 with job id 751 depending on [729, 731]
woom.workflow: INFO Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/gtask3
woom.workflow: INFO Created batch script: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/gtask3/job.sh
woom.workflow: INFO Submitted task: cycles/cycles0/gtask3 with job id 753 depending on [751]
woom.workflow: INFO Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask2
woom.workflow: INFO Created batch script: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask2/job.sh
woom.workflow: INFO Submitted task: cycles/cycles1/ctask2 with job id 755 depending on [746, 749, 753]
woom.workflow: INFO Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask3
woom.workflow: INFO Created batch script: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-02T00:00:00+00:00/ctask3/job.sh
woom.workflow: INFO Submitted task: cycles/cycles1/ctask3 with job id 757 depending on [746, 749, 753]
woom.workflow: INFO Successfully submitted cycle: 2023-08-02T00:00:00+00:00
woom.workflow: INFO Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00
woom.workflow: INFO Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask0
woom.workflow: INFO Created batch script: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask0/job.sh
woom.workflow: INFO Submitted task: cycles/cycles0/ctask0 with job id 759 depending on [729, 731]
woom.workflow: INFO Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask1
woom.workflow: INFO Created batch script: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask1/job.sh
woom.workflow: INFO Submitted task: cycles/cycles0/ctask1 with job id 762 depending on [729, 731]
woom.workflow: INFO Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/gtask2
woom.workflow: INFO Created batch script: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/gtask2/job.sh
woom.workflow: INFO Submitted task: cycles/cycles0/gtask2 with job id 764 depending on [729, 731]
woom.workflow: INFO Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/gtask3
woom.workflow: INFO Created batch script: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/gtask3/job.sh
woom.workflow: INFO Submitted task: cycles/cycles0/gtask3 with job id 766 depending on [764]
woom.workflow: INFO Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask2
woom.workflow: INFO Created batch script: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask2/job.sh
woom.workflow: INFO Submitted task: cycles/cycles1/ctask2 with job id 771 depending on [759, 762, 766]
woom.workflow: INFO Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask3
woom.workflow: INFO Created batch script: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/2023-08-03T00:00:00+00:00/ctask3/job.sh
woom.workflow: INFO Submitted task: cycles/cycles1/ctask3 with job id 773 depending on [759, 762, 766]
woom.workflow: INFO Successfully submitted cycle: 2023-08-03T00:00:00+00:00
woom.workflow: INFO Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/epilog
woom.workflow: INFO Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/epilog/etask0
woom.workflow: INFO Created batch script: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/epilog/etask0/job.sh
woom.workflow: INFO Submitted task: epilog/epilog0/etask0 with job id 775 depending on [742, 744, 755, 757, 771, 773]
woom.workflow: INFO Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/epilog/etask1
woom.workflow: INFO Created batch script: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/epilog/etask1/job.sh
woom.workflow: INFO Submitted task: epilog/epilog0/etask1 with job id 777 depending on [742, 744, 755, 757, 771, 773]
woom.workflow: INFO Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/epilog/etask2
woom.workflow: INFO Created batch script: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/epilog/etask2/job.sh
woom.workflow: INFO Submitted task: epilog/epilog1/etask2 with job id 779 depending on [775, 777]
woom.workflow: INFO Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/epilog/etask3
woom.workflow: INFO Created batch script: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/stable/examples/academic/all_stages/jobs/epilog/etask3/job.sh
woom.workflow: INFO Submitted task: epilog/epilog1/etask3 with job id 781 depending on [775, 777]
woom.workflow: INFO Successfully submitted stage: epilog
woom.cli : INFO Successfully ran the workflow!
Check status#
Check what is running or finished.
$ woom show status
╭──────────┬─────────┬────────┬───────────────────────────┬───────────────────────────────────────╮
│ STATUS │ JOBID │ TASK │ CYCLE │ SUBMISSION DIR │
├──────────┼─────────┼────────┼───────────────────────────┼───────────────────────────────────────┤
│ SUCCESS │ 721 │ ptask0 │ prolog │ jobs/prolog/ptask0 │
│ SUCCESS │ 723 │ ptask1 │ prolog │ jobs/prolog/ptask1 │
│ SUCCESS │ 725 │ gtask0 │ prolog │ jobs/prolog/gtask0 │
│ SUCCESS │ 727 │ gtask1 │ prolog │ jobs/prolog/gtask1 │
│ SUCCESS │ 729 │ ptask2 │ prolog │ jobs/prolog/ptask2 │
│ SUCCESS │ 731 │ ptask3 │ prolog │ jobs/prolog/ptask3 │
│ SUCCESS │ 733 │ ctask0 │ 2023-08-01T00:00:00+00:00 │ jobs/2023-08-01T00:00:00+00:00/ctask0 │
│ SUCCESS │ 736 │ ctask1 │ 2023-08-01T00:00:00+00:00 │ jobs/2023-08-01T00:00:00+00:00/ctask1 │
│ SUCCESS │ 738 │ gtask2 │ 2023-08-01T00:00:00+00:00 │ jobs/2023-08-01T00:00:00+00:00/gtask2 │
│ SUCCESS │ 740 │ gtask3 │ 2023-08-01T00:00:00+00:00 │ jobs/2023-08-01T00:00:00+00:00/gtask3 │
│ SUCCESS │ 742 │ ctask2 │ 2023-08-01T00:00:00+00:00 │ jobs/2023-08-01T00:00:00+00:00/ctask2 │
│ SUCCESS │ 744 │ ctask3 │ 2023-08-01T00:00:00+00:00 │ jobs/2023-08-01T00:00:00+00:00/ctask3 │
│ SUCCESS │ 746 │ ctask0 │ 2023-08-02T00:00:00+00:00 │ jobs/2023-08-02T00:00:00+00:00/ctask0 │
│ SUCCESS │ 749 │ ctask1 │ 2023-08-02T00:00:00+00:00 │ jobs/2023-08-02T00:00:00+00:00/ctask1 │
│ SUCCESS │ 751 │ gtask2 │ 2023-08-02T00:00:00+00:00 │ jobs/2023-08-02T00:00:00+00:00/gtask2 │
│ SUCCESS │ 753 │ gtask3 │ 2023-08-02T00:00:00+00:00 │ jobs/2023-08-02T00:00:00+00:00/gtask3 │
│ SUCCESS │ 755 │ ctask2 │ 2023-08-02T00:00:00+00:00 │ jobs/2023-08-02T00:00:00+00:00/ctask2 │
│ SUCCESS │ 757 │ ctask3 │ 2023-08-02T00:00:00+00:00 │ jobs/2023-08-02T00:00:00+00:00/ctask3 │
│ SUCCESS │ 759 │ ctask0 │ 2023-08-03T00:00:00+00:00 │ jobs/2023-08-03T00:00:00+00:00/ctask0 │
│ SUCCESS │ 762 │ ctask1 │ 2023-08-03T00:00:00+00:00 │ jobs/2023-08-03T00:00:00+00:00/ctask1 │
│ SUCCESS │ 764 │ gtask2 │ 2023-08-03T00:00:00+00:00 │ jobs/2023-08-03T00:00:00+00:00/gtask2 │
│ SUCCESS │ 766 │ gtask3 │ 2023-08-03T00:00:00+00:00 │ jobs/2023-08-03T00:00:00+00:00/gtask3 │
│ SUCCESS │ 771 │ ctask2 │ 2023-08-03T00:00:00+00:00 │ jobs/2023-08-03T00:00:00+00:00/ctask2 │
│ SUCCESS │ 773 │ ctask3 │ 2023-08-03T00:00:00+00:00 │ jobs/2023-08-03T00:00:00+00:00/ctask3 │
│ SUCCESS │ 775 │ etask0 │ epilog │ jobs/epilog/etask0 │
│ SUCCESS │ 777 │ etask1 │ epilog │ jobs/epilog/etask1 │
│ SUCCESS │ 779 │ etask2 │ epilog │ jobs/epilog/etask2 │
│ RUNNING │ 781 │ etask3 │ epilog │ jobs/epilog/etask3 │
╰──────────┴─────────┴────────┴───────────────────────────┴───────────────────────────────────────╯
Show run directories#
Show where tasks were executed.
$ woom show run_dirs
╭────────┬───────────────────────────┬───────────────────────────────────────────────────────────────╮
│ TASK │ CYCLE │ RUN DIR │
├────────┼───────────────────────────┼───────────────────────────────────────────────────────────────┤
│ ptask0 │ prolog │ /home/docs/woom/scratch/woom/prolog/ptask0 │
│ ptask1 │ prolog │ /home/docs/woom/scratch/woom/prolog/ptask1 │
│ gtask0 │ prolog │ /home/docs/woom/scratch/woom/prolog/gtask0 │
│ gtask1 │ prolog │ /home/docs/woom/scratch/woom/prolog/gtask1 │
│ ptask2 │ prolog │ /home/docs/woom/scratch/woom/prolog/ptask2 │
│ ptask3 │ prolog │ /home/docs/woom/scratch/woom/prolog/ptask3 │
│ ctask0 │ 2023-08-01T00:00:00+00:00 │ /home/docs/woom/scratch/woom/2023-08-01T00:00:00+00:00/ctask0 │
│ ctask1 │ 2023-08-01T00:00:00+00:00 │ /home/docs/woom/scratch/woom/2023-08-01T00:00:00+00:00/ctask1 │
│ gtask2 │ 2023-08-01T00:00:00+00:00 │ /home/docs/woom/scratch/woom/2023-08-01T00:00:00+00:00/gtask2 │
│ gtask3 │ 2023-08-01T00:00:00+00:00 │ /home/docs/woom/scratch/woom/2023-08-01T00:00:00+00:00/gtask3 │
│ ctask2 │ 2023-08-01T00:00:00+00:00 │ /home/docs/woom/scratch/woom/2023-08-01T00:00:00+00:00/ctask2 │
│ ctask3 │ 2023-08-01T00:00:00+00:00 │ /home/docs/woom/scratch/woom/2023-08-01T00:00:00+00:00/ctask3 │
│ ctask0 │ 2023-08-02T00:00:00+00:00 │ /home/docs/woom/scratch/woom/2023-08-02T00:00:00+00:00/ctask0 │
│ ctask1 │ 2023-08-02T00:00:00+00:00 │ /home/docs/woom/scratch/woom/2023-08-02T00:00:00+00:00/ctask1 │
│ gtask2 │ 2023-08-02T00:00:00+00:00 │ /home/docs/woom/scratch/woom/2023-08-02T00:00:00+00:00/gtask2 │
│ gtask3 │ 2023-08-02T00:00:00+00:00 │ /home/docs/woom/scratch/woom/2023-08-02T00:00:00+00:00/gtask3 │
│ ctask2 │ 2023-08-02T00:00:00+00:00 │ /home/docs/woom/scratch/woom/2023-08-02T00:00:00+00:00/ctask2 │
│ ctask3 │ 2023-08-02T00:00:00+00:00 │ /home/docs/woom/scratch/woom/2023-08-02T00:00:00+00:00/ctask3 │
│ ctask0 │ 2023-08-03T00:00:00+00:00 │ /home/docs/woom/scratch/woom/2023-08-03T00:00:00+00:00/ctask0 │
│ ctask1 │ 2023-08-03T00:00:00+00:00 │ /home/docs/woom/scratch/woom/2023-08-03T00:00:00+00:00/ctask1 │
│ gtask2 │ 2023-08-03T00:00:00+00:00 │ /home/docs/woom/scratch/woom/2023-08-03T00:00:00+00:00/gtask2 │
│ gtask3 │ 2023-08-03T00:00:00+00:00 │ /home/docs/woom/scratch/woom/2023-08-03T00:00:00+00:00/gtask3 │
│ ctask2 │ 2023-08-03T00:00:00+00:00 │ /home/docs/woom/scratch/woom/2023-08-03T00:00:00+00:00/ctask2 │
│ ctask3 │ 2023-08-03T00:00:00+00:00 │ /home/docs/woom/scratch/woom/2023-08-03T00:00:00+00:00/ctask3 │
│ etask0 │ epilog │ /home/docs/woom/scratch/woom/epilog/etask0 │
│ etask1 │ epilog │ /home/docs/woom/scratch/woom/epilog/etask1 │
│ etask2 │ epilog │ /home/docs/woom/scratch/woom/epilog/etask2 │
│ etask3 │ epilog │ /home/docs/woom/scratch/woom/epilog/etask3 │
╰────────┴───────────────────────────┴───────────────────────────────────────────────────────────────╯