Cycling on date intervals#

About#

This example demonstrates how to work with time cycles in woom, showing both date manipulation and inter-cycle dependencies.

The workflow runs 4 cycles over 6-hour intervals from 2020-01-01 to 2020-01-02, with two tasks:

task0 - Date manipulation:

Shows how to work with cycle dates using cycle.begin_date
Demonstrates date arithmetic with add() method (e.g., add('-10D') for 10 days earlier)
Formats dates using strftime() for custom output formats

task1 - Inter-cycle dependencies:

Creates a file result.txt that accumulates data across cycles
On first cycle (cycle.is_first): Initializes the file
On subsequent cycles: Copies the file from previous cycle using cycle.prev
Uses workflow.get_task_run_dir() to locate the previous cycle’s run directory
Appends the current cycle.token to track progression

This example demonstrates sequential cycle dependencies where each cycle builds on results from the previous one, essential for time-stepping models and iterative workflows.

Path: examples/academic/cycles.

Configuring#

workflow.cfg#

[app]
name=CROCO-CYCLES
conf=MANGA
exp=EXP1

[cycles]
begin_date=2020-01-01
end_date=2020-01-02
round=D
freq=6h

[stages]
    [[cycles]]
    seq0=task0,task1

tasks.cfg#

[task0]
    [[content]]
    commandline=echo {{ cycle.begin_date.add('-10D').strftime('%Y%m%d') }} to {{ cycle.begin_date.add("1h") }}; sleep 3

    [[submit]]
    time=01:00:00

[task1]
    [[content]]
    commandline="""{% if not cycle.is_first %}
cp {{ workflow.get_task_run_dir("task1", cycle.prev) }}/result.txt .
echo {{ cycle.token }} >> result.txt
cat result.txt
{% else %}
echo "We initialize result.txt"
echo {{ cycle.token }} > result.txt
{% endif %}
"""

hosts.cfg#

[datarmor]
patterns=datavisu*,*.ice.ifremer.fr,datarmor*
scheduler=pbspro
module_setup=. /etc/profile.d/modules.sh

    [[queues]]
    seq=sequentiel
    omp=omp

    [[dirs]]
    scratch=$SCRATCH
    work=$DATAWORK

Running#

Overview#

Let’s have an overview of stages before running the workflow.

$ woom show overview
##################################### APP ######################################
name: CROCO-CYCLES
conf: MANGA
exp: EXP1
################################## TASK TREE ###################################
cycles:
    - seq0: task0 // task1
#################################### CYCLES ####################################
2020-01-01T00:00:00+00:00 -> 2020-01-01T06:00:00+00:00 (0 days 06:00:00)
2020-01-01T06:00:00+00:00 -> 2020-01-01T12:00:00+00:00 (0 days 06:00:00)
2020-01-01T12:00:00+00:00 -> 2020-01-01T18:00:00+00:00 (0 days 06:00:00)
2020-01-01T18:00:00+00:00 -> 2020-01-02T00:00:00+00:00 (0 days 06:00:00)
################################### ENSEMBLE ###################################
no member

Dry run#

Now let’s run the workflow in test (dry) and debug modes.

$ woom run --log-no-color --log-level debug --dry-run
woom.log    : DEBUG    *** STARTED LOG SESSION ***
woom.cli    : DEBUG    Run the workflow
woom.cli    : DEBUG    Loading extensions
woom.cli    : INFO     No extension to load
woom.cli    : DEBUG    Load workflow config: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/workflow.cfg
woom.cli    : INFO     Loaded workflow config
woom.cli    : INFO     App name: CROCO-CYCLES
woom.cli    : INFO     App conf: MANGA
woom.cli    : INFO     App exp: EXP1
woom.cli    : DEBUG    Initialize the host manager
woom.cli    : INFO     Initialized the host manager
woom.cli    : DEBUG    Load hosts config file: hosts.cfg
woom.cli    : INFO     Loaded hosts config file: hosts.cfg
woom.cli    : DEBUG    Infer host
woom.cli    : INFO     Infered host: local
woom.cli    : DEBUG    Initialize the task manager
woom.cli    : INFO     Initialized the task manager
woom.cli    : DEBUG    Load the task config file: tasks.cfg
woom.cli    : INFO     Loaded the task config file: tasks.cfg
woom.cli    : DEBUG    Initialize the workflow
woom.workflow: DEBUG    Task tree:
cycles:
    - seq0: task0 // task1
woom.cli    : INFO     Initialized the workflow
woom.cli    : INFO     Successfully setup the workflow!
woom.cli    : DEBUG    Run the workflow
woom.workflow: DEBUG    Running the workflow in fake mode
woom.workflow: DEBUG    Entering stage: prolog
woom.workflow: DEBUG    No sequence of task. Skipping...
woom.workflow: DEBUG    Entering stage: cycles
woom.workflow: INFO     Cycling on intervals from 2020-01-01 00:00:00+00:00 to 2020-01-02 00:00:00+00:00 in 4 time(s)
woom.workflow: DEBUG    Running cycle: 2020-01-01T00:00:00+00:00 -> 2020-01-01T06:00:00+00:00 (0 days 06:00:00)
woom.workflow: DEBUG    Entering sequence: seq0
woom.workflow: DEBUG    Running task: cycles/seq0/task0
woom.workflow: DEBUG    Task path: CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task0
woom.workflow: DEBUG    Cleaning task: cycles/seq0/task0
woom.job    : INFO     Started job manager: BackgroundJobManager()
woom.workflow: DEBUG    Submitting task: cycles/seq0/task0
woom.workflow: DEBUG      Dependencies: 
woom.workflow: DEBUG    Creating directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task0
woom.workflow: INFO     Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task0
woom.workflow: INFO     Fake submission: CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task0 → bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task0/job.sh
woom.workflow: DEBUG    Fake submission:
--------------- submission command ---------------
bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task0/job.sh
-------------- batch script content --------------
#!/bin/bash

# Prolog
set -eo pipefail
# - handler for graceful termination
on_sigterm() {
    echo "Received termination signal, cleaning up..."
    # Just exit cleanly, let on_exit handle status
    exit 0
}
# - handler for killing termination
on_sigkill() {
    echo "Received kill signal, cleaning up..." >&2
    # Just exit cleanly, let on_exit handle status
    exit 1
}
# - handler for exit (always called)
on_exit() {
    status=$?
    if [ ! -f "/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task0/job.terminating" ]; then
        echo $status > "/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task0/job.status"
    fi
    exit $status
}
trap on_sigterm SIGKILL
trap on_sigkill SIGTERM SIGINT
trap on_exit EXIT


# Environment variables
export WOOM_TASK_NAME="task0"
export WOOM_RUN_DIR="/home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task0"
export WOOM_WORKFLOW="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/workflow.cfg"
export WOOM_HOST="local"
export WOOM_TASKMANAGER="/home/docs/checkouts/readthedocs.org/user_builds/woom/envs/latest/lib/python3.11/site-packages/woom/tasks.cfg:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/tasks.cfg"
export WOOM_JOBMANAGER="BackgroundJobManager"
export WOOM_TASK_TREE_CYCLES_SEQ0="['task0']:['task1']"
export WOOM_CYCLES="2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00:2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00:2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00:2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00"
export WOOM_NMEMBERS="0"
export WOOM_MEMBERS=""
export WOOM_PATHS_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/bin"
export WOOM_PATHS_PYTHONPATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib/python"
export WOOM_PATHS_LIBRARY_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib"
export WOOM_PATHS_INCLUDE_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/include"
export WOOM_APP_PATH="CROCO-CYCLES/MANGA/EXP1"
export WOOM_APP_NAME="CROCO-CYCLES"
export WOOM_APP_CONF="MANGA"
export WOOM_APP_EXP="EXP1"
export WOOM_CYCLES_BEGIN_DATE="2020-01-01T00:00:00+00:00"
export WOOM_CYCLES_END_DATE="2020-01-02T00:00:00+00:00"
export WOOM_CYCLES_ROUND="D"
export WOOM_CYCLES_FREQ="6h"
export WOOM_CYCLES_NCYCLES="0"
export WOOM_CYCLES_INDEP="0"
export WOOM_CYCLES_AS_INTERVALS="1"
export WOOM_CYCLES_HORIZON=""
export WOOM_SCRATCH_DIR="/home/docs/woom/scratch"
export WOOM_WORK_DIR="/home/docs/woom/work"
export WOOM_WORKFLOW_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles"
export WOOM_LOG_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/log"
export WOOM_CYCLE="2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE="2020-01-01T00:00:00+00:00"
export WOOM_CYCLE_LABEL="2020-01-01T00:00:00+00:00 -> 2020-01-01T06:00:00+00:00 (0 days 06:00:00)"
export WOOM_CYCLE_TOKEN="2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00"
export WOOM_CYCLE_END_DATE="2020-01-01T06:00:00+00:00"
export WOOM_CYCLE_DURATION="P0DT6H0M0S"
export WOOM_CYCLE_IS_FIRST="1"
export WOOM_CYCLE_IS_LAST="0"
export WOOM_CYCLE_NEXT="2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00"
export WOOM_CYCLE_PREV=""
export WOOM_CYCLE_BEGIN_DATE_NEXT="2020-01-01T06:00:00+00:00"
export WOOM_CYCLE_LABEL_NEXT="2020-01-01T06:00:00+00:00 -> 2020-01-01T12:00:00+00:00 (0 days 06:00:00)"
export WOOM_CYCLE_TOKEN_NEXT="2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00"
export WOOM_CYCLE_END_DATE_NEXT="2020-01-01T12:00:00+00:00"
export WOOM_CYCLE_DURATION_NEXT="P0DT6H0M0S"
export WOOM_CYCLE_IS_FIRST_NEXT="0"
export WOOM_CYCLE_IS_LAST_NEXT="0"
export WOOM_CYCLE_NEXT_NEXT="2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00"
export WOOM_CYCLE_PREV_NEXT="2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00"
export WOOM_MEMBER=""
export WOOM_TASK="task0"
export WOOM_TASK_PATH="CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task0"
export WOOM_TASK_RUN_DIR="/home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task0"
export WOOM_TASK_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task0"
export WOOM_TASK_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task0/job.sh"
export WOOM_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task0"
export WOOM_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task0/job.sh"
export WOOM_TASK_ENV=""
export WOOM_ENV=""
export WOOM_TASK_CONTEXT_JSON="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task0/context.json"
export WOOM_CONTEXT_JSON="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task0/context.json"
export PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/bin:$PATH
export PYTHONPATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib/python:$PYTHONPATH
export LIBRARY_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib:$LIBRARY_PATH
export INCLUDE_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/include:$INCLUDE_PATH


# Go to run dir
{ mkdir -p /home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task0; cd /home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task0; } || exit 1

# Run the commandline(s)
echo 20191222 to 2020-01-01 01:00:00+00:00; sleep 3
--------------------------------------------------
woom.workflow: INFO     Submitted task: cycles/seq0/task0 with job id 674040
woom.workflow: DEBUG    Running task: cycles/seq0/task1
woom.workflow: DEBUG    Task path: CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task1
woom.workflow: DEBUG    Cleaning task: cycles/seq0/task1
woom.workflow: DEBUG    Submitting task: cycles/seq0/task1
woom.workflow: DEBUG      Dependencies: 
woom.workflow: DEBUG    Creating directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task1
woom.workflow: INFO     Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task1
woom.workflow: INFO     Fake submission: CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task1 → bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task1/job.sh
woom.workflow: DEBUG    Fake submission:
--------------- submission command ---------------
bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task1/job.sh
-------------- batch script content --------------
#!/bin/bash

# Prolog
set -eo pipefail
# - handler for graceful termination
on_sigterm() {
    echo "Received termination signal, cleaning up..."
    # Just exit cleanly, let on_exit handle status
    exit 0
}
# - handler for killing termination
on_sigkill() {
    echo "Received kill signal, cleaning up..." >&2
    # Just exit cleanly, let on_exit handle status
    exit 1
}
# - handler for exit (always called)
on_exit() {
    status=$?
    if [ ! -f "/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task1/job.terminating" ]; then
        echo $status > "/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task1/job.status"
    fi
    exit $status
}
trap on_sigterm SIGKILL
trap on_sigkill SIGTERM SIGINT
trap on_exit EXIT


# Environment variables
export WOOM_TASK_NAME="task1"
export WOOM_RUN_DIR="/home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task1"
export WOOM_WORKFLOW="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/workflow.cfg"
export WOOM_HOST="local"
export WOOM_TASKMANAGER="/home/docs/checkouts/readthedocs.org/user_builds/woom/envs/latest/lib/python3.11/site-packages/woom/tasks.cfg:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/tasks.cfg"
export WOOM_JOBMANAGER="BackgroundJobManager"
export WOOM_TASK_TREE_CYCLES_SEQ0="['task0']:['task1']"
export WOOM_CYCLES="2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00:2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00:2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00:2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00"
export WOOM_NMEMBERS="0"
export WOOM_MEMBERS=""
export WOOM_PATHS_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/bin"
export WOOM_PATHS_PYTHONPATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib/python"
export WOOM_PATHS_LIBRARY_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib"
export WOOM_PATHS_INCLUDE_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/include"
export WOOM_APP_PATH="CROCO-CYCLES/MANGA/EXP1"
export WOOM_APP_NAME="CROCO-CYCLES"
export WOOM_APP_CONF="MANGA"
export WOOM_APP_EXP="EXP1"
export WOOM_CYCLES_BEGIN_DATE="2020-01-01T00:00:00+00:00"
export WOOM_CYCLES_END_DATE="2020-01-02T00:00:00+00:00"
export WOOM_CYCLES_ROUND="D"
export WOOM_CYCLES_FREQ="6h"
export WOOM_CYCLES_NCYCLES="0"
export WOOM_CYCLES_INDEP="0"
export WOOM_CYCLES_AS_INTERVALS="1"
export WOOM_CYCLES_HORIZON=""
export WOOM_SCRATCH_DIR="/home/docs/woom/scratch"
export WOOM_WORK_DIR="/home/docs/woom/work"
export WOOM_WORKFLOW_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles"
export WOOM_LOG_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/log"
export WOOM_CYCLE="2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE="2020-01-01T00:00:00+00:00"
export WOOM_CYCLE_LABEL="2020-01-01T00:00:00+00:00 -> 2020-01-01T06:00:00+00:00 (0 days 06:00:00)"
export WOOM_CYCLE_TOKEN="2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00"
export WOOM_CYCLE_END_DATE="2020-01-01T06:00:00+00:00"
export WOOM_CYCLE_DURATION="P0DT6H0M0S"
export WOOM_CYCLE_IS_FIRST="1"
export WOOM_CYCLE_IS_LAST="0"
export WOOM_CYCLE_NEXT="2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00"
export WOOM_CYCLE_PREV=""
export WOOM_CYCLE_BEGIN_DATE_NEXT="2020-01-01T06:00:00+00:00"
export WOOM_CYCLE_LABEL_NEXT="2020-01-01T06:00:00+00:00 -> 2020-01-01T12:00:00+00:00 (0 days 06:00:00)"
export WOOM_CYCLE_TOKEN_NEXT="2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00"
export WOOM_CYCLE_END_DATE_NEXT="2020-01-01T12:00:00+00:00"
export WOOM_CYCLE_DURATION_NEXT="P0DT6H0M0S"
export WOOM_CYCLE_IS_FIRST_NEXT="0"
export WOOM_CYCLE_IS_LAST_NEXT="0"
export WOOM_CYCLE_NEXT_NEXT="2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00"
export WOOM_CYCLE_PREV_NEXT="2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00"
export WOOM_MEMBER=""
export WOOM_TASK="task1"
export WOOM_TASK_PATH="CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task1"
export WOOM_TASK_RUN_DIR="/home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task1"
export WOOM_TASK_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task1"
export WOOM_TASK_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task1/job.sh"
export WOOM_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task1"
export WOOM_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task1/job.sh"
export WOOM_TASK_ENV=""
export WOOM_ENV=""
export WOOM_TASK_CONTEXT_JSON="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task1/context.json"
export WOOM_CONTEXT_JSON="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task1/context.json"
export PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/bin:$PATH
export PYTHONPATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib/python:$PYTHONPATH
export LIBRARY_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib:$LIBRARY_PATH
export INCLUDE_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/include:$INCLUDE_PATH


# Go to run dir
{ mkdir -p /home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task1; cd /home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task1; } || exit 1

# Run the commandline(s)
echo "We initialize result.txt"
echo 2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00 > result.txt
--------------------------------------------------
woom.workflow: INFO     Submitted task: cycles/seq0/task1 with job id 686835
woom.workflow: INFO     Successfully submitted cycle: 2020-01-01T00:00:00+00:00 -> 2020-01-01T06:00:00+00:00 (0 days 06:00:00)
woom.workflow: DEBUG    Running cycle: 2020-01-01T06:00:00+00:00 -> 2020-01-01T12:00:00+00:00 (0 days 06:00:00)
woom.workflow: DEBUG    Entering sequence: seq0
woom.workflow: DEBUG    Running task: cycles/seq0/task0
woom.workflow: DEBUG    Task path: CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task0
woom.workflow: DEBUG    Cleaning task: cycles/seq0/task0
woom.workflow: DEBUG    Submitting task: cycles/seq0/task0
woom.workflow: DEBUG      Dependencies: 674040, 686835
woom.workflow: DEBUG    Creating directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task0
woom.workflow: INFO     Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task0
woom.workflow: INFO     Fake submission: CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task0 → bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task0/job.sh
woom.workflow: DEBUG    Fake submission:
--------------- submission command ---------------
bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task0/job.sh
-------------- batch script content --------------
#!/bin/bash

# Prolog
set -eo pipefail
# - handler for graceful termination
on_sigterm() {
    echo "Received termination signal, cleaning up..."
    # Just exit cleanly, let on_exit handle status
    exit 0
}
# - handler for killing termination
on_sigkill() {
    echo "Received kill signal, cleaning up..." >&2
    # Just exit cleanly, let on_exit handle status
    exit 1
}
# - handler for exit (always called)
on_exit() {
    status=$?
    if [ ! -f "/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task0/job.terminating" ]; then
        echo $status > "/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task0/job.status"
    fi
    exit $status
}
trap on_sigterm SIGKILL
trap on_sigkill SIGTERM SIGINT
trap on_exit EXIT


# Environment variables
export WOOM_TASK_NAME="task0"
export WOOM_RUN_DIR="/home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task0"
export WOOM_WORKFLOW="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/workflow.cfg"
export WOOM_HOST="local"
export WOOM_TASKMANAGER="/home/docs/checkouts/readthedocs.org/user_builds/woom/envs/latest/lib/python3.11/site-packages/woom/tasks.cfg:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/tasks.cfg"
export WOOM_JOBMANAGER="BackgroundJobManager"
export WOOM_TASK_TREE_CYCLES_SEQ0="['task0']:['task1']"
export WOOM_CYCLES="2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00:2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00:2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00:2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00"
export WOOM_NMEMBERS="0"
export WOOM_MEMBERS=""
export WOOM_PATHS_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/bin"
export WOOM_PATHS_PYTHONPATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib/python"
export WOOM_PATHS_LIBRARY_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib"
export WOOM_PATHS_INCLUDE_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/include"
export WOOM_APP_PATH="CROCO-CYCLES/MANGA/EXP1"
export WOOM_APP_NAME="CROCO-CYCLES"
export WOOM_APP_CONF="MANGA"
export WOOM_APP_EXP="EXP1"
export WOOM_CYCLES_BEGIN_DATE="2020-01-01T00:00:00+00:00"
export WOOM_CYCLES_END_DATE="2020-01-02T00:00:00+00:00"
export WOOM_CYCLES_ROUND="D"
export WOOM_CYCLES_FREQ="6h"
export WOOM_CYCLES_NCYCLES="0"
export WOOM_CYCLES_INDEP="0"
export WOOM_CYCLES_AS_INTERVALS="1"
export WOOM_CYCLES_HORIZON=""
export WOOM_SCRATCH_DIR="/home/docs/woom/scratch"
export WOOM_WORK_DIR="/home/docs/woom/work"
export WOOM_WORKFLOW_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles"
export WOOM_LOG_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/log"
export WOOM_CYCLE="2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE="2020-01-01T06:00:00+00:00"
export WOOM_CYCLE_LABEL="2020-01-01T06:00:00+00:00 -> 2020-01-01T12:00:00+00:00 (0 days 06:00:00)"
export WOOM_CYCLE_TOKEN="2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00"
export WOOM_CYCLE_END_DATE="2020-01-01T12:00:00+00:00"
export WOOM_CYCLE_DURATION="P0DT6H0M0S"
export WOOM_CYCLE_IS_FIRST="0"
export WOOM_CYCLE_IS_LAST="0"
export WOOM_CYCLE_NEXT="2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00"
export WOOM_CYCLE_PREV="2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE_NEXT="2020-01-01T12:00:00+00:00"
export WOOM_CYCLE_LABEL_NEXT="2020-01-01T12:00:00+00:00 -> 2020-01-01T18:00:00+00:00 (0 days 06:00:00)"
export WOOM_CYCLE_TOKEN_NEXT="2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00"
export WOOM_CYCLE_END_DATE_NEXT="2020-01-01T18:00:00+00:00"
export WOOM_CYCLE_DURATION_NEXT="P0DT6H0M0S"
export WOOM_CYCLE_IS_FIRST_NEXT="0"
export WOOM_CYCLE_IS_LAST_NEXT="0"
export WOOM_CYCLE_NEXT_NEXT="2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00"
export WOOM_CYCLE_PREV_NEXT="2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00"
export WOOM_MEMBER=""
export WOOM_TASK="task0"
export WOOM_TASK_PATH="CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task0"
export WOOM_TASK_RUN_DIR="/home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task0"
export WOOM_TASK_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task0"
export WOOM_TASK_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task0/job.sh"
export WOOM_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task0"
export WOOM_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task0/job.sh"
export WOOM_TASK_ENV=""
export WOOM_ENV=""
export WOOM_TASK_CONTEXT_JSON="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task0/context.json"
export WOOM_CONTEXT_JSON="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task0/context.json"
export WOOM_CYCLE_BEGIN_DATE_PREV="2020-01-01T00:00:00+00:00"
export WOOM_CYCLE_LABEL_PREV="2020-01-01T00:00:00+00:00 -> 2020-01-01T06:00:00+00:00 (0 days 06:00:00)"
export WOOM_CYCLE_TOKEN_PREV="2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00"
export WOOM_CYCLE_END_DATE_PREV="2020-01-01T06:00:00+00:00"
export WOOM_CYCLE_DURATION_PREV="P0DT6H0M0S"
export WOOM_CYCLE_IS_FIRST_PREV="1"
export WOOM_CYCLE_IS_LAST_PREV="0"
export WOOM_CYCLE_NEXT_PREV="2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00"
export WOOM_CYCLE_PREV_PREV=""
export PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/bin:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/bin:$PATH
export PYTHONPATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib/python:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib/python:$PYTHONPATH
export LIBRARY_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib:$LIBRARY_PATH
export INCLUDE_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/include:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/include:$INCLUDE_PATH


# Go to run dir
{ mkdir -p /home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task0; cd /home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task0; } || exit 1

# Run the commandline(s)
echo 20191222 to 2020-01-01 07:00:00+00:00; sleep 3
--------------------------------------------------
woom.workflow: INFO     Submitted task: cycles/seq0/task0 with job id 215791 depending on [674040, 686835]
woom.workflow: DEBUG    Running task: cycles/seq0/task1
woom.workflow: DEBUG    Task path: CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task1
woom.workflow: DEBUG    Cleaning task: cycles/seq0/task1
woom.workflow: DEBUG    Submitting task: cycles/seq0/task1
woom.workflow: DEBUG      Dependencies: 674040, 686835
woom.workflow: DEBUG    Creating directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task1
woom.workflow: INFO     Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task1
woom.workflow: INFO     Fake submission: CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task1 → bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task1/job.sh
woom.workflow: DEBUG    Fake submission:
--------------- submission command ---------------
bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task1/job.sh
-------------- batch script content --------------
#!/bin/bash

# Prolog
set -eo pipefail
# - handler for graceful termination
on_sigterm() {
    echo "Received termination signal, cleaning up..."
    # Just exit cleanly, let on_exit handle status
    exit 0
}
# - handler for killing termination
on_sigkill() {
    echo "Received kill signal, cleaning up..." >&2
    # Just exit cleanly, let on_exit handle status
    exit 1
}
# - handler for exit (always called)
on_exit() {
    status=$?
    if [ ! -f "/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task1/job.terminating" ]; then
        echo $status > "/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task1/job.status"
    fi
    exit $status
}
trap on_sigterm SIGKILL
trap on_sigkill SIGTERM SIGINT
trap on_exit EXIT


# Environment variables
export WOOM_TASK_NAME="task1"
export WOOM_RUN_DIR="/home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task1"
export WOOM_WORKFLOW="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/workflow.cfg"
export WOOM_HOST="local"
export WOOM_TASKMANAGER="/home/docs/checkouts/readthedocs.org/user_builds/woom/envs/latest/lib/python3.11/site-packages/woom/tasks.cfg:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/tasks.cfg"
export WOOM_JOBMANAGER="BackgroundJobManager"
export WOOM_TASK_TREE_CYCLES_SEQ0="['task0']:['task1']"
export WOOM_CYCLES="2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00:2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00:2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00:2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00"
export WOOM_NMEMBERS="0"
export WOOM_MEMBERS=""
export WOOM_PATHS_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/bin"
export WOOM_PATHS_PYTHONPATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib/python"
export WOOM_PATHS_LIBRARY_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib"
export WOOM_PATHS_INCLUDE_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/include"
export WOOM_APP_PATH="CROCO-CYCLES/MANGA/EXP1"
export WOOM_APP_NAME="CROCO-CYCLES"
export WOOM_APP_CONF="MANGA"
export WOOM_APP_EXP="EXP1"
export WOOM_CYCLES_BEGIN_DATE="2020-01-01T00:00:00+00:00"
export WOOM_CYCLES_END_DATE="2020-01-02T00:00:00+00:00"
export WOOM_CYCLES_ROUND="D"
export WOOM_CYCLES_FREQ="6h"
export WOOM_CYCLES_NCYCLES="0"
export WOOM_CYCLES_INDEP="0"
export WOOM_CYCLES_AS_INTERVALS="1"
export WOOM_CYCLES_HORIZON=""
export WOOM_SCRATCH_DIR="/home/docs/woom/scratch"
export WOOM_WORK_DIR="/home/docs/woom/work"
export WOOM_WORKFLOW_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles"
export WOOM_LOG_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/log"
export WOOM_CYCLE="2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE="2020-01-01T06:00:00+00:00"
export WOOM_CYCLE_LABEL="2020-01-01T06:00:00+00:00 -> 2020-01-01T12:00:00+00:00 (0 days 06:00:00)"
export WOOM_CYCLE_TOKEN="2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00"
export WOOM_CYCLE_END_DATE="2020-01-01T12:00:00+00:00"
export WOOM_CYCLE_DURATION="P0DT6H0M0S"
export WOOM_CYCLE_IS_FIRST="0"
export WOOM_CYCLE_IS_LAST="0"
export WOOM_CYCLE_NEXT="2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00"
export WOOM_CYCLE_PREV="2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE_NEXT="2020-01-01T12:00:00+00:00"
export WOOM_CYCLE_LABEL_NEXT="2020-01-01T12:00:00+00:00 -> 2020-01-01T18:00:00+00:00 (0 days 06:00:00)"
export WOOM_CYCLE_TOKEN_NEXT="2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00"
export WOOM_CYCLE_END_DATE_NEXT="2020-01-01T18:00:00+00:00"
export WOOM_CYCLE_DURATION_NEXT="P0DT6H0M0S"
export WOOM_CYCLE_IS_FIRST_NEXT="0"
export WOOM_CYCLE_IS_LAST_NEXT="0"
export WOOM_CYCLE_NEXT_NEXT="2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00"
export WOOM_CYCLE_PREV_NEXT="2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00"
export WOOM_MEMBER=""
export WOOM_TASK="task1"
export WOOM_TASK_PATH="CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task1"
export WOOM_TASK_RUN_DIR="/home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task1"
export WOOM_TASK_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task1"
export WOOM_TASK_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task1/job.sh"
export WOOM_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task1"
export WOOM_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task1/job.sh"
export WOOM_TASK_ENV=""
export WOOM_ENV=""
export WOOM_TASK_CONTEXT_JSON="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task1/context.json"
export WOOM_CONTEXT_JSON="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task1/context.json"
export WOOM_CYCLE_BEGIN_DATE_PREV="2020-01-01T00:00:00+00:00"
export WOOM_CYCLE_LABEL_PREV="2020-01-01T00:00:00+00:00 -> 2020-01-01T06:00:00+00:00 (0 days 06:00:00)"
export WOOM_CYCLE_TOKEN_PREV="2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00"
export WOOM_CYCLE_END_DATE_PREV="2020-01-01T06:00:00+00:00"
export WOOM_CYCLE_DURATION_PREV="P0DT6H0M0S"
export WOOM_CYCLE_IS_FIRST_PREV="1"
export WOOM_CYCLE_IS_LAST_PREV="0"
export WOOM_CYCLE_NEXT_PREV="2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00"
export WOOM_CYCLE_PREV_PREV=""
export PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/bin:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/bin:$PATH
export PYTHONPATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib/python:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib/python:$PYTHONPATH
export LIBRARY_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib:$LIBRARY_PATH
export INCLUDE_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/include:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/include:$INCLUDE_PATH


# Go to run dir
{ mkdir -p /home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task1; cd /home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task1; } || exit 1

# Run the commandline(s)
cp /home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task1/result.txt .
echo 2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00 >> result.txt
cat result.txt
--------------------------------------------------
woom.workflow: INFO     Submitted task: cycles/seq0/task1 with job id 1664 depending on [674040, 686835]
woom.workflow: INFO     Successfully submitted cycle: 2020-01-01T06:00:00+00:00 -> 2020-01-01T12:00:00+00:00 (0 days 06:00:00)
woom.workflow: DEBUG    Running cycle: 2020-01-01T12:00:00+00:00 -> 2020-01-01T18:00:00+00:00 (0 days 06:00:00)
woom.workflow: DEBUG    Entering sequence: seq0
woom.workflow: DEBUG    Running task: cycles/seq0/task0
woom.workflow: DEBUG    Task path: CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task0
woom.workflow: DEBUG    Cleaning task: cycles/seq0/task0
woom.workflow: DEBUG    Submitting task: cycles/seq0/task0
woom.workflow: DEBUG      Dependencies: 215791, 1664
woom.workflow: DEBUG    Creating directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task0
woom.workflow: INFO     Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task0
woom.workflow: INFO     Fake submission: CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task0 → bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task0/job.sh
woom.workflow: DEBUG    Fake submission:
--------------- submission command ---------------
bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task0/job.sh
-------------- batch script content --------------
#!/bin/bash

# Prolog
set -eo pipefail
# - handler for graceful termination
on_sigterm() {
    echo "Received termination signal, cleaning up..."
    # Just exit cleanly, let on_exit handle status
    exit 0
}
# - handler for killing termination
on_sigkill() {
    echo "Received kill signal, cleaning up..." >&2
    # Just exit cleanly, let on_exit handle status
    exit 1
}
# - handler for exit (always called)
on_exit() {
    status=$?
    if [ ! -f "/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task0/job.terminating" ]; then
        echo $status > "/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task0/job.status"
    fi
    exit $status
}
trap on_sigterm SIGKILL
trap on_sigkill SIGTERM SIGINT
trap on_exit EXIT


# Environment variables
export WOOM_TASK_NAME="task0"
export WOOM_RUN_DIR="/home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task0"
export WOOM_WORKFLOW="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/workflow.cfg"
export WOOM_HOST="local"
export WOOM_TASKMANAGER="/home/docs/checkouts/readthedocs.org/user_builds/woom/envs/latest/lib/python3.11/site-packages/woom/tasks.cfg:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/tasks.cfg"
export WOOM_JOBMANAGER="BackgroundJobManager"
export WOOM_TASK_TREE_CYCLES_SEQ0="['task0']:['task1']"
export WOOM_CYCLES="2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00:2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00:2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00:2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00"
export WOOM_NMEMBERS="0"
export WOOM_MEMBERS=""
export WOOM_PATHS_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/bin"
export WOOM_PATHS_PYTHONPATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib/python"
export WOOM_PATHS_LIBRARY_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib"
export WOOM_PATHS_INCLUDE_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/include"
export WOOM_APP_PATH="CROCO-CYCLES/MANGA/EXP1"
export WOOM_APP_NAME="CROCO-CYCLES"
export WOOM_APP_CONF="MANGA"
export WOOM_APP_EXP="EXP1"
export WOOM_CYCLES_BEGIN_DATE="2020-01-01T00:00:00+00:00"
export WOOM_CYCLES_END_DATE="2020-01-02T00:00:00+00:00"
export WOOM_CYCLES_ROUND="D"
export WOOM_CYCLES_FREQ="6h"
export WOOM_CYCLES_NCYCLES="0"
export WOOM_CYCLES_INDEP="0"
export WOOM_CYCLES_AS_INTERVALS="1"
export WOOM_CYCLES_HORIZON=""
export WOOM_SCRATCH_DIR="/home/docs/woom/scratch"
export WOOM_WORK_DIR="/home/docs/woom/work"
export WOOM_WORKFLOW_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles"
export WOOM_LOG_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/log"
export WOOM_CYCLE="2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE="2020-01-01T12:00:00+00:00"
export WOOM_CYCLE_LABEL="2020-01-01T12:00:00+00:00 -> 2020-01-01T18:00:00+00:00 (0 days 06:00:00)"
export WOOM_CYCLE_TOKEN="2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00"
export WOOM_CYCLE_END_DATE="2020-01-01T18:00:00+00:00"
export WOOM_CYCLE_DURATION="P0DT6H0M0S"
export WOOM_CYCLE_IS_FIRST="0"
export WOOM_CYCLE_IS_LAST="0"
export WOOM_CYCLE_NEXT="2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00"
export WOOM_CYCLE_PREV="2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE_NEXT="2020-01-01T18:00:00+00:00"
export WOOM_CYCLE_LABEL_NEXT="2020-01-01T18:00:00+00:00 -> 2020-01-02T00:00:00+00:00 (0 days 06:00:00)"
export WOOM_CYCLE_TOKEN_NEXT="2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00"
export WOOM_CYCLE_END_DATE_NEXT="2020-01-02T00:00:00+00:00"
export WOOM_CYCLE_DURATION_NEXT="P0DT6H0M0S"
export WOOM_CYCLE_IS_FIRST_NEXT="0"
export WOOM_CYCLE_IS_LAST_NEXT="1"
export WOOM_CYCLE_NEXT_NEXT=""
export WOOM_CYCLE_PREV_NEXT="2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00"
export WOOM_MEMBER=""
export WOOM_TASK="task0"
export WOOM_TASK_PATH="CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task0"
export WOOM_TASK_RUN_DIR="/home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task0"
export WOOM_TASK_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task0"
export WOOM_TASK_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task0/job.sh"
export WOOM_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task0"
export WOOM_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task0/job.sh"
export WOOM_TASK_ENV=""
export WOOM_ENV=""
export WOOM_TASK_CONTEXT_JSON="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task0/context.json"
export WOOM_CONTEXT_JSON="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task0/context.json"
export WOOM_CYCLE_BEGIN_DATE_PREV="2020-01-01T06:00:00+00:00"
export WOOM_CYCLE_LABEL_PREV="2020-01-01T06:00:00+00:00 -> 2020-01-01T12:00:00+00:00 (0 days 06:00:00)"
export WOOM_CYCLE_TOKEN_PREV="2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00"
export WOOM_CYCLE_END_DATE_PREV="2020-01-01T12:00:00+00:00"
export WOOM_CYCLE_DURATION_PREV="P0DT6H0M0S"
export WOOM_CYCLE_IS_FIRST_PREV="0"
export WOOM_CYCLE_IS_LAST_PREV="0"
export WOOM_CYCLE_NEXT_PREV="2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00"
export WOOM_CYCLE_PREV_PREV="2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00"
export PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/bin:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/bin:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/bin:$PATH
export PYTHONPATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib/python:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib/python:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib/python:$PYTHONPATH
export LIBRARY_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib:$LIBRARY_PATH
export INCLUDE_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/include:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/include:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/include:$INCLUDE_PATH


# Go to run dir
{ mkdir -p /home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task0; cd /home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task0; } || exit 1

# Run the commandline(s)
echo 20191222 to 2020-01-01 13:00:00+00:00; sleep 3
--------------------------------------------------
woom.workflow: INFO     Submitted task: cycles/seq0/task0 with job id 493897 depending on [215791, 1664]
woom.workflow: DEBUG    Running task: cycles/seq0/task1
woom.workflow: DEBUG    Task path: CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task1
woom.workflow: DEBUG    Cleaning task: cycles/seq0/task1
woom.workflow: DEBUG    Submitting task: cycles/seq0/task1
woom.workflow: DEBUG      Dependencies: 215791, 1664
woom.workflow: DEBUG    Creating directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task1
woom.workflow: INFO     Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task1
woom.workflow: INFO     Fake submission: CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task1 → bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task1/job.sh
woom.workflow: DEBUG    Fake submission:
--------------- submission command ---------------
bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task1/job.sh
-------------- batch script content --------------
#!/bin/bash

# Prolog
set -eo pipefail
# - handler for graceful termination
on_sigterm() {
    echo "Received termination signal, cleaning up..."
    # Just exit cleanly, let on_exit handle status
    exit 0
}
# - handler for killing termination
on_sigkill() {
    echo "Received kill signal, cleaning up..." >&2
    # Just exit cleanly, let on_exit handle status
    exit 1
}
# - handler for exit (always called)
on_exit() {
    status=$?
    if [ ! -f "/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task1/job.terminating" ]; then
        echo $status > "/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task1/job.status"
    fi
    exit $status
}
trap on_sigterm SIGKILL
trap on_sigkill SIGTERM SIGINT
trap on_exit EXIT


# Environment variables
export WOOM_TASK_NAME="task1"
export WOOM_RUN_DIR="/home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task1"
export WOOM_WORKFLOW="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/workflow.cfg"
export WOOM_HOST="local"
export WOOM_TASKMANAGER="/home/docs/checkouts/readthedocs.org/user_builds/woom/envs/latest/lib/python3.11/site-packages/woom/tasks.cfg:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/tasks.cfg"
export WOOM_JOBMANAGER="BackgroundJobManager"
export WOOM_TASK_TREE_CYCLES_SEQ0="['task0']:['task1']"
export WOOM_CYCLES="2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00:2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00:2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00:2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00"
export WOOM_NMEMBERS="0"
export WOOM_MEMBERS=""
export WOOM_PATHS_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/bin"
export WOOM_PATHS_PYTHONPATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib/python"
export WOOM_PATHS_LIBRARY_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib"
export WOOM_PATHS_INCLUDE_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/include"
export WOOM_APP_PATH="CROCO-CYCLES/MANGA/EXP1"
export WOOM_APP_NAME="CROCO-CYCLES"
export WOOM_APP_CONF="MANGA"
export WOOM_APP_EXP="EXP1"
export WOOM_CYCLES_BEGIN_DATE="2020-01-01T00:00:00+00:00"
export WOOM_CYCLES_END_DATE="2020-01-02T00:00:00+00:00"
export WOOM_CYCLES_ROUND="D"
export WOOM_CYCLES_FREQ="6h"
export WOOM_CYCLES_NCYCLES="0"
export WOOM_CYCLES_INDEP="0"
export WOOM_CYCLES_AS_INTERVALS="1"
export WOOM_CYCLES_HORIZON=""
export WOOM_SCRATCH_DIR="/home/docs/woom/scratch"
export WOOM_WORK_DIR="/home/docs/woom/work"
export WOOM_WORKFLOW_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles"
export WOOM_LOG_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/log"
export WOOM_CYCLE="2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE="2020-01-01T12:00:00+00:00"
export WOOM_CYCLE_LABEL="2020-01-01T12:00:00+00:00 -> 2020-01-01T18:00:00+00:00 (0 days 06:00:00)"
export WOOM_CYCLE_TOKEN="2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00"
export WOOM_CYCLE_END_DATE="2020-01-01T18:00:00+00:00"
export WOOM_CYCLE_DURATION="P0DT6H0M0S"
export WOOM_CYCLE_IS_FIRST="0"
export WOOM_CYCLE_IS_LAST="0"
export WOOM_CYCLE_NEXT="2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00"
export WOOM_CYCLE_PREV="2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE_NEXT="2020-01-01T18:00:00+00:00"
export WOOM_CYCLE_LABEL_NEXT="2020-01-01T18:00:00+00:00 -> 2020-01-02T00:00:00+00:00 (0 days 06:00:00)"
export WOOM_CYCLE_TOKEN_NEXT="2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00"
export WOOM_CYCLE_END_DATE_NEXT="2020-01-02T00:00:00+00:00"
export WOOM_CYCLE_DURATION_NEXT="P0DT6H0M0S"
export WOOM_CYCLE_IS_FIRST_NEXT="0"
export WOOM_CYCLE_IS_LAST_NEXT="1"
export WOOM_CYCLE_NEXT_NEXT=""
export WOOM_CYCLE_PREV_NEXT="2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00"
export WOOM_MEMBER=""
export WOOM_TASK="task1"
export WOOM_TASK_PATH="CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task1"
export WOOM_TASK_RUN_DIR="/home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task1"
export WOOM_TASK_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task1"
export WOOM_TASK_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task1/job.sh"
export WOOM_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task1"
export WOOM_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task1/job.sh"
export WOOM_TASK_ENV=""
export WOOM_ENV=""
export WOOM_TASK_CONTEXT_JSON="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task1/context.json"
export WOOM_CONTEXT_JSON="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task1/context.json"
export WOOM_CYCLE_BEGIN_DATE_PREV="2020-01-01T06:00:00+00:00"
export WOOM_CYCLE_LABEL_PREV="2020-01-01T06:00:00+00:00 -> 2020-01-01T12:00:00+00:00 (0 days 06:00:00)"
export WOOM_CYCLE_TOKEN_PREV="2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00"
export WOOM_CYCLE_END_DATE_PREV="2020-01-01T12:00:00+00:00"
export WOOM_CYCLE_DURATION_PREV="P0DT6H0M0S"
export WOOM_CYCLE_IS_FIRST_PREV="0"
export WOOM_CYCLE_IS_LAST_PREV="0"
export WOOM_CYCLE_NEXT_PREV="2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00"
export WOOM_CYCLE_PREV_PREV="2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00"
export PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/bin:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/bin:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/bin:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/bin:$PATH
export PYTHONPATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib/python:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib/python:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib/python:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib/python:$PYTHONPATH
export LIBRARY_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib:$LIBRARY_PATH
export INCLUDE_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/include:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/include:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/include:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/include:$INCLUDE_PATH


# Go to run dir
{ mkdir -p /home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task1; cd /home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task1; } || exit 1

# Run the commandline(s)
cp /home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task1/result.txt .
echo 2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00 >> result.txt
cat result.txt
--------------------------------------------------
woom.workflow: INFO     Submitted task: cycles/seq0/task1 with job id 477584 depending on [215791, 1664]
woom.workflow: INFO     Successfully submitted cycle: 2020-01-01T12:00:00+00:00 -> 2020-01-01T18:00:00+00:00 (0 days 06:00:00)
woom.workflow: DEBUG    Running cycle: 2020-01-01T18:00:00+00:00 -> 2020-01-02T00:00:00+00:00 (0 days 06:00:00)
woom.workflow: DEBUG    Entering sequence: seq0
woom.workflow: DEBUG    Running task: cycles/seq0/task0
woom.workflow: DEBUG    Task path: CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task0
woom.workflow: DEBUG    Cleaning task: cycles/seq0/task0
woom.workflow: DEBUG    Submitting task: cycles/seq0/task0
woom.workflow: DEBUG      Dependencies: 493897, 477584
woom.workflow: DEBUG    Creating directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task0
woom.workflow: INFO     Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task0
woom.workflow: INFO     Fake submission: CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task0 → bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task0/job.sh
woom.workflow: DEBUG    Fake submission:
--------------- submission command ---------------
bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task0/job.sh
-------------- batch script content --------------
#!/bin/bash

# Prolog
set -eo pipefail
# - handler for graceful termination
on_sigterm() {
    echo "Received termination signal, cleaning up..."
    # Just exit cleanly, let on_exit handle status
    exit 0
}
# - handler for killing termination
on_sigkill() {
    echo "Received kill signal, cleaning up..." >&2
    # Just exit cleanly, let on_exit handle status
    exit 1
}
# - handler for exit (always called)
on_exit() {
    status=$?
    if [ ! -f "/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task0/job.terminating" ]; then
        echo $status > "/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task0/job.status"
    fi
    exit $status
}
trap on_sigterm SIGKILL
trap on_sigkill SIGTERM SIGINT
trap on_exit EXIT


# Environment variables
export WOOM_TASK_NAME="task0"
export WOOM_RUN_DIR="/home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task0"
export WOOM_WORKFLOW="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/workflow.cfg"
export WOOM_HOST="local"
export WOOM_TASKMANAGER="/home/docs/checkouts/readthedocs.org/user_builds/woom/envs/latest/lib/python3.11/site-packages/woom/tasks.cfg:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/tasks.cfg"
export WOOM_JOBMANAGER="BackgroundJobManager"
export WOOM_TASK_TREE_CYCLES_SEQ0="['task0']:['task1']"
export WOOM_CYCLES="2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00:2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00:2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00:2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00"
export WOOM_NMEMBERS="0"
export WOOM_MEMBERS=""
export WOOM_PATHS_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/bin"
export WOOM_PATHS_PYTHONPATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib/python"
export WOOM_PATHS_LIBRARY_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib"
export WOOM_PATHS_INCLUDE_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/include"
export WOOM_APP_PATH="CROCO-CYCLES/MANGA/EXP1"
export WOOM_APP_NAME="CROCO-CYCLES"
export WOOM_APP_CONF="MANGA"
export WOOM_APP_EXP="EXP1"
export WOOM_CYCLES_BEGIN_DATE="2020-01-01T00:00:00+00:00"
export WOOM_CYCLES_END_DATE="2020-01-02T00:00:00+00:00"
export WOOM_CYCLES_ROUND="D"
export WOOM_CYCLES_FREQ="6h"
export WOOM_CYCLES_NCYCLES="0"
export WOOM_CYCLES_INDEP="0"
export WOOM_CYCLES_AS_INTERVALS="1"
export WOOM_CYCLES_HORIZON=""
export WOOM_SCRATCH_DIR="/home/docs/woom/scratch"
export WOOM_WORK_DIR="/home/docs/woom/work"
export WOOM_WORKFLOW_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles"
export WOOM_LOG_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/log"
export WOOM_CYCLE="2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE="2020-01-01T18:00:00+00:00"
export WOOM_CYCLE_LABEL="2020-01-01T18:00:00+00:00 -> 2020-01-02T00:00:00+00:00 (0 days 06:00:00)"
export WOOM_CYCLE_TOKEN="2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00"
export WOOM_CYCLE_END_DATE="2020-01-02T00:00:00+00:00"
export WOOM_CYCLE_DURATION="P0DT6H0M0S"
export WOOM_CYCLE_IS_FIRST="0"
export WOOM_CYCLE_IS_LAST="1"
export WOOM_CYCLE_NEXT=""
export WOOM_CYCLE_PREV="2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE_NEXT="2020-01-01T18:00:00+00:00"
export WOOM_CYCLE_LABEL_NEXT="2020-01-01T18:00:00+00:00 -> 2020-01-02T00:00:00+00:00 (0 days 06:00:00)"
export WOOM_CYCLE_TOKEN_NEXT="2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00"
export WOOM_CYCLE_END_DATE_NEXT="2020-01-02T00:00:00+00:00"
export WOOM_CYCLE_DURATION_NEXT="P0DT6H0M0S"
export WOOM_CYCLE_IS_FIRST_NEXT="0"
export WOOM_CYCLE_IS_LAST_NEXT="1"
export WOOM_CYCLE_NEXT_NEXT=""
export WOOM_CYCLE_PREV_NEXT="2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00"
export WOOM_MEMBER=""
export WOOM_TASK="task0"
export WOOM_TASK_PATH="CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task0"
export WOOM_TASK_RUN_DIR="/home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task0"
export WOOM_TASK_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task0"
export WOOM_TASK_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task0/job.sh"
export WOOM_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task0"
export WOOM_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task0/job.sh"
export WOOM_TASK_ENV=""
export WOOM_ENV=""
export WOOM_TASK_CONTEXT_JSON="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task0/context.json"
export WOOM_CONTEXT_JSON="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task0/context.json"
export WOOM_CYCLE_BEGIN_DATE_PREV="2020-01-01T12:00:00+00:00"
export WOOM_CYCLE_LABEL_PREV="2020-01-01T12:00:00+00:00 -> 2020-01-01T18:00:00+00:00 (0 days 06:00:00)"
export WOOM_CYCLE_TOKEN_PREV="2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00"
export WOOM_CYCLE_END_DATE_PREV="2020-01-01T18:00:00+00:00"
export WOOM_CYCLE_DURATION_PREV="P0DT6H0M0S"
export WOOM_CYCLE_IS_FIRST_PREV="0"
export WOOM_CYCLE_IS_LAST_PREV="0"
export WOOM_CYCLE_NEXT_PREV="2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00"
export WOOM_CYCLE_PREV_PREV="2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00"
export PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/bin:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/bin:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/bin:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/bin:$PATH
export PYTHONPATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib/python:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib/python:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib/python:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib/python:$PYTHONPATH
export LIBRARY_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib:$LIBRARY_PATH
export INCLUDE_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/include:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/include:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/include:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/include:$INCLUDE_PATH


# Go to run dir
{ mkdir -p /home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task0; cd /home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task0; } || exit 1

# Run the commandline(s)
echo 20191222 to 2020-01-01 19:00:00+00:00; sleep 3
--------------------------------------------------
woom.workflow: INFO     Submitted task: cycles/seq0/task0 with job id 464026 depending on [493897, 477584]
woom.workflow: DEBUG    Running task: cycles/seq0/task1
woom.workflow: DEBUG    Task path: CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task1
woom.workflow: DEBUG    Cleaning task: cycles/seq0/task1
woom.workflow: DEBUG    Submitting task: cycles/seq0/task1
woom.workflow: DEBUG      Dependencies: 493897, 477584
woom.workflow: DEBUG    Creating directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task1
woom.workflow: INFO     Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task1
woom.workflow: INFO     Fake submission: CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task1 → bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task1/job.sh
woom.workflow: DEBUG    Fake submission:
--------------- submission command ---------------
bash /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task1/job.sh
-------------- batch script content --------------
#!/bin/bash

# Prolog
set -eo pipefail
# - handler for graceful termination
on_sigterm() {
    echo "Received termination signal, cleaning up..."
    # Just exit cleanly, let on_exit handle status
    exit 0
}
# - handler for killing termination
on_sigkill() {
    echo "Received kill signal, cleaning up..." >&2
    # Just exit cleanly, let on_exit handle status
    exit 1
}
# - handler for exit (always called)
on_exit() {
    status=$?
    if [ ! -f "/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task1/job.terminating" ]; then
        echo $status > "/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task1/job.status"
    fi
    exit $status
}
trap on_sigterm SIGKILL
trap on_sigkill SIGTERM SIGINT
trap on_exit EXIT


# Environment variables
export WOOM_TASK_NAME="task1"
export WOOM_RUN_DIR="/home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task1"
export WOOM_WORKFLOW="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/workflow.cfg"
export WOOM_HOST="local"
export WOOM_TASKMANAGER="/home/docs/checkouts/readthedocs.org/user_builds/woom/envs/latest/lib/python3.11/site-packages/woom/tasks.cfg:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/tasks.cfg"
export WOOM_JOBMANAGER="BackgroundJobManager"
export WOOM_TASK_TREE_CYCLES_SEQ0="['task0']:['task1']"
export WOOM_CYCLES="2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00:2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00:2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00:2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00"
export WOOM_NMEMBERS="0"
export WOOM_MEMBERS=""
export WOOM_PATHS_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/bin"
export WOOM_PATHS_PYTHONPATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib/python"
export WOOM_PATHS_LIBRARY_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib"
export WOOM_PATHS_INCLUDE_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/include"
export WOOM_APP_PATH="CROCO-CYCLES/MANGA/EXP1"
export WOOM_APP_NAME="CROCO-CYCLES"
export WOOM_APP_CONF="MANGA"
export WOOM_APP_EXP="EXP1"
export WOOM_CYCLES_BEGIN_DATE="2020-01-01T00:00:00+00:00"
export WOOM_CYCLES_END_DATE="2020-01-02T00:00:00+00:00"
export WOOM_CYCLES_ROUND="D"
export WOOM_CYCLES_FREQ="6h"
export WOOM_CYCLES_NCYCLES="0"
export WOOM_CYCLES_INDEP="0"
export WOOM_CYCLES_AS_INTERVALS="1"
export WOOM_CYCLES_HORIZON=""
export WOOM_SCRATCH_DIR="/home/docs/woom/scratch"
export WOOM_WORK_DIR="/home/docs/woom/work"
export WOOM_WORKFLOW_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles"
export WOOM_LOG_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/log"
export WOOM_CYCLE="2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE="2020-01-01T18:00:00+00:00"
export WOOM_CYCLE_LABEL="2020-01-01T18:00:00+00:00 -> 2020-01-02T00:00:00+00:00 (0 days 06:00:00)"
export WOOM_CYCLE_TOKEN="2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00"
export WOOM_CYCLE_END_DATE="2020-01-02T00:00:00+00:00"
export WOOM_CYCLE_DURATION="P0DT6H0M0S"
export WOOM_CYCLE_IS_FIRST="0"
export WOOM_CYCLE_IS_LAST="1"
export WOOM_CYCLE_NEXT=""
export WOOM_CYCLE_PREV="2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00"
export WOOM_CYCLE_BEGIN_DATE_NEXT="2020-01-01T12:00:00+00:00"
export WOOM_CYCLE_LABEL_NEXT="2020-01-01T12:00:00+00:00 -> 2020-01-01T18:00:00+00:00 (0 days 06:00:00)"
export WOOM_CYCLE_TOKEN_NEXT="2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00"
export WOOM_CYCLE_END_DATE_NEXT="2020-01-01T18:00:00+00:00"
export WOOM_CYCLE_DURATION_NEXT="P0DT6H0M0S"
export WOOM_CYCLE_IS_FIRST_NEXT="0"
export WOOM_CYCLE_IS_LAST_NEXT="0"
export WOOM_CYCLE_NEXT_NEXT="2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00"
export WOOM_CYCLE_PREV_NEXT="2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00"
export WOOM_MEMBER=""
export WOOM_TASK="task1"
export WOOM_TASK_PATH="CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task1"
export WOOM_TASK_RUN_DIR="/home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task1"
export WOOM_TASK_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task1"
export WOOM_TASK_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task1/job.sh"
export WOOM_SUBMISSION_DIR="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task1"
export WOOM_SCRIPT_PATH="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task1/job.sh"
export WOOM_TASK_ENV=""
export WOOM_ENV=""
export WOOM_TASK_CONTEXT_JSON="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task1/context.json"
export WOOM_CONTEXT_JSON="/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task1/context.json"
export WOOM_CYCLE_BEGIN_DATE_PREV="2020-01-01T12:00:00+00:00"
export WOOM_CYCLE_LABEL_PREV="2020-01-01T12:00:00+00:00 -> 2020-01-01T18:00:00+00:00 (0 days 06:00:00)"
export WOOM_CYCLE_TOKEN_PREV="2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00"
export WOOM_CYCLE_END_DATE_PREV="2020-01-01T18:00:00+00:00"
export WOOM_CYCLE_DURATION_PREV="P0DT6H0M0S"
export WOOM_CYCLE_IS_FIRST_PREV="0"
export WOOM_CYCLE_IS_LAST_PREV="0"
export WOOM_CYCLE_NEXT_PREV="2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00"
export WOOM_CYCLE_PREV_PREV="2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00"
export PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/bin:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/bin:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/bin:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/bin:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/bin:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/bin:$PATH
export PYTHONPATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib/python:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib/python:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib/python:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib/python:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib/python:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib/python:$PYTHONPATH
export LIBRARY_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/lib:$LIBRARY_PATH
export INCLUDE_PATH=/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/include:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/include:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/include:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/include:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/include:/home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/include:$INCLUDE_PATH


# Go to run dir
{ mkdir -p /home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task1; cd /home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task1; } || exit 1

# Run the commandline(s)
cp /home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task1/result.txt .
echo 2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00 >> result.txt
cat result.txt
--------------------------------------------------
woom.workflow: INFO     Submitted task: cycles/seq0/task1 with job id 251105 depending on [493897, 477584]
woom.workflow: INFO     Successfully submitted cycle: 2020-01-01T18:00:00+00:00 -> 2020-01-02T00:00:00+00:00 (0 days 06:00:00)
woom.workflow: DEBUG    Entering stage: epilog
woom.workflow: DEBUG    No sequence of task. Skipping...
woom.workflow: DEBUG    Terminating non-blocking jobs
woom.cli    : INFO     Successfully ran the workflow!

Normal run#

And finally in run it.

$ woom run --log-no-color
woom.cli    : INFO     No extension to load
woom.cli    : INFO     Loaded workflow config
woom.cli    : INFO     App name: CROCO-CYCLES
woom.cli    : INFO     App conf: MANGA
woom.cli    : INFO     App exp: EXP1
woom.cli    : INFO     Initialized the host manager
woom.cli    : INFO     Loaded hosts config file: hosts.cfg
woom.cli    : INFO     Infered host: local
woom.cli    : INFO     Initialized the task manager
woom.cli    : INFO     Loaded the task config file: tasks.cfg
woom.cli    : INFO     Initialized the workflow
woom.cli    : INFO     Successfully setup the workflow!
woom.workflow: INFO     Cycling on intervals from 2020-01-01 00:00:00+00:00 to 2020-01-02 00:00:00+00:00 in 4 time(s)
woom.job    : INFO     Started job manager: BackgroundJobManager()
woom.workflow: INFO     Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task0
woom.workflow: INFO     Created batch script: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task0/job.sh
woom.workflow: INFO     Submitted task: cycles/seq0/task0 with job id 838
woom.workflow: INFO     Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task1
woom.workflow: INFO     Created batch script: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task1/job.sh
woom.workflow: INFO     Submitted task: cycles/seq0/task1 with job id 841
woom.workflow: INFO     Successfully submitted cycle: 2020-01-01T00:00:00+00:00 -> 2020-01-01T06:00:00+00:00 (0 days 06:00:00)
woom.workflow: INFO     Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task0
woom.workflow: INFO     Created batch script: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task0/job.sh
woom.workflow: INFO     Submitted task: cycles/seq0/task0 with job id 843 depending on [838, 841]
woom.workflow: INFO     Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task1
woom.workflow: INFO     Created batch script: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task1/job.sh
woom.workflow: INFO     Submitted task: cycles/seq0/task1 with job id 846 depending on [838, 841]
woom.workflow: INFO     Successfully submitted cycle: 2020-01-01T06:00:00+00:00 -> 2020-01-01T12:00:00+00:00 (0 days 06:00:00)
woom.workflow: INFO     Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task0
woom.workflow: INFO     Created batch script: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task0/job.sh
woom.workflow: INFO     Submitted task: cycles/seq0/task0 with job id 853 depending on [843, 846]
woom.workflow: INFO     Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task1
woom.workflow: INFO     Created batch script: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task1/job.sh
woom.workflow: INFO     Submitted task: cycles/seq0/task1 with job id 856 depending on [843, 846]
woom.workflow: INFO     Successfully submitted cycle: 2020-01-01T12:00:00+00:00 -> 2020-01-01T18:00:00+00:00 (0 days 06:00:00)
woom.workflow: INFO     Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task0
woom.workflow: INFO     Created batch script: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task0/job.sh
woom.workflow: INFO     Submitted task: cycles/seq0/task0 with job id 860 depending on [853, 856]
woom.workflow: INFO     Created directory: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task1
woom.workflow: INFO     Created batch script: /home/docs/checkouts/readthedocs.org/user_builds/woom/checkouts/latest/examples/academic/cycles/jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task1/job.sh
woom.workflow: INFO     Submitted task: cycles/seq0/task1 with job id 863 depending on [853, 856]
woom.workflow: INFO     Successfully submitted cycle: 2020-01-01T18:00:00+00:00 -> 2020-01-02T00:00:00+00:00 (0 days 06:00:00)
woom.cli    : INFO     Successfully ran the workflow!

Check status#

Check what is running or finished.

$ woom show status
╭──────────┬─────────┬────────┬─────────────────────────────────────────────────────┬────────────────────────────────────────────────────────────────────────────────────────╮
│ STATUS   │   JOBID │ TASK   │ CYCLE                                               │ SUBMISSION DIR                                                                         │
├──────────┼─────────┼────────┼─────────────────────────────────────────────────────┼────────────────────────────────────────────────────────────────────────────────────────┤
│ SUCCESS  │     838 │ task0  │ 2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00 │ jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task0 │
│ SUCCESS  │     841 │ task1  │ 2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00 │ jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task1 │
│ SUCCESS  │     843 │ task0  │ 2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00 │ jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task0 │
│ SUCCESS  │     846 │ task1  │ 2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00 │ jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task1 │
│ SUCCESS  │     853 │ task0  │ 2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00 │ jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task0 │
│ SUCCESS  │     856 │ task1  │ 2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00 │ jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task1 │
│ RUNNING  │     860 │ task0  │ 2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00 │ jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task0 │
│ SUCCESS  │     863 │ task1  │ 2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00 │ jobs/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task1 │
╰──────────┴─────────┴────────┴─────────────────────────────────────────────────────┴────────────────────────────────────────────────────────────────────────────────────────╯

Show run directories#

Show where tasks were executed.

$ woom show run_dirs
╭────────┬─────────────────────────────────────────────────────┬────────────────────────────────────────────────────────────────────────────────────────────────────────────────╮
│ TASK   │ CYCLE                                               │ RUN DIR                                                                                                        │
├────────┼─────────────────────────────────────────────────────┼────────────────────────────────────────────────────────────────────────────────────────────────────────────────┤
│ task0  │ 2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00 │ /home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task0 │
│ task1  │ 2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00 │ /home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T00:00:00+00:00-2020-01-01T06:00:00+00:00/task1 │
│ task0  │ 2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00 │ /home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task0 │
│ task1  │ 2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00 │ /home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T06:00:00+00:00-2020-01-01T12:00:00+00:00/task1 │
│ task0  │ 2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00 │ /home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task0 │
│ task1  │ 2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00 │ /home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T12:00:00+00:00-2020-01-01T18:00:00+00:00/task1 │
│ task0  │ 2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00 │ /home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task0 │
│ task1  │ 2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00 │ /home/docs/woom/scratch/woom/CROCO-CYCLES/MANGA/EXP1/2020-01-01T18:00:00+00:00-2020-01-02T00:00:00+00:00/task1 │
╰────────┴─────────────────────────────────────────────────────┴────────────────────────────────────────────────────────────────────────────────────────────────────────────────╯

Cycling on date intervals

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